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Information on SUBCLASS 2.5.6
Subclass Accession number: 157
Subclass: 2.5.6 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.1 (>75 %)  4.1.1 (>75 %)  4.1.1.39
GO : GO:0004497 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016830 (>75 %)  GO:0016831 (>75 %)  GO:0016984 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  54861 (>75 %)  54966 (>75 %)  54967 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 10.0 +/- 10.4
Average RMSD (Å) : 0.760 +/- 0.167

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXhppX
(φψ)-conformation: aababb
Pattern: xx[agnv][ekq][alw][ALY][AKR][DKPR][fikl][AFTV][DKT][AKRS][altv]x
Conservation:-0.906-0.906-1.4520.375-0.6880.8931.3280.480-1.1490.1171.5580.891-0.541-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dus_A_681dus   A6880VIGIALADEVKST.HHHHHHGGGSSEE.aaaaaaaaababb.
1f0k_A_1331f0k   A133146LTNKWLAKIATKVMHHHHHHTTT-SEEEaaaaaaaaaxabbb
1fnn_A_561fnn   A6275KLWELYKDKTTARFHHHHHHTTS---EEaaaaaaaaabaxbx
1p9l_A_1071p9l   A114127HFAKQAARFFDSAEHHHHHHGGG-SEEEaaaaaaaaababbb
1qgo_A_881qgo   A95108REVQLLRPLFTRLTHHHHHHGGGSSEEEaaaaaaaaababbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dus_A_681dus   A     MSESELENOMETHIONINE V - 68
1dus_A_681dus   A     MSESELENOMETHIONINE I - 69
1dus_A_681dus   A     MSESELENOMETHIONINE G - 70
1dus_A_681dus   A     MSESELENOMETHIONINE I - 71
1dus_A_681dus   A     MSESELENOMETHIONINE T - 80
1fnn_A_561fnn   A     MGMAGNESIUM ION K - 56
1fnn_A_561fnn   A     ADPADENOSINE-5'-DIPHOSPHATE K - 56
1fnn_A_561fnn   A     MGMAGNESIUM ION T - 57
1fnn_A_561fnn   A     ADPADENOSINE-5'-DIPHOSPHATE T - 57
1fnn_A_561fnn   A     MGMAGNESIUM ION V - 58
1fnn_A_561fnn   A     ADPADENOSINE-5'-DIPHOSPHATE V - 58
1fnn_A_561fnn   A     ADPADENOSINE-5'-DIPHOSPHATE T - 59
1fnn_A_561fnn   A     MGMAGNESIUM ION Y - 77
1p9l_A_1071p9l   A     PDCPYRIDINE-2,6-DICARBOXYLIC ACID H - 132

Clusters included in this Subclass
CLUSTER: HE.5.99
CLUSTER: HE.6.46