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Information on SUBCLASS 1.1.1
Subclass Accession number: 1592
Subclass: 1.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51904 (>75 %)  51905 (>75 %)  
 Number of loops: 51

Average sequence ID (%) : 6.4 +/- 12.2
Average RMSD (Å) : 0.520 +/- 0.180

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXXXX
(φψ)-conformation: bbabb
Pattern: xxxxxxx
Conservation:-1.0001.2300.5560.724-0.374-0.729-1.408
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8h_*_2011a8h   -201206.LSISRP.EE-EEE.bxabbp
1bkc_A_3821bkc   A384389LTSTKN.EEESEE.bbbabb.
1d2k_A_2861d2k   A289295GMPLYGREEESEEExbxabbb
1dar_*_1611dar   -161167PVVMQLPEEE-EEExbxabbx
1dhk_B_491dhk   B4953.IQIRD..EESEE..bxabx.
1dpj_A_2811dpj   A282288CISAITPEEE-EEEbbxaxbx
1edq_A_4371edq   A440446GTAMYGREEESEEExbbabbb
1edt_*_2111edt   -211216.LSPAAV.EE-EEE.bbaxbb
1ej8_A_1571ej8   A157163IECFNESEEE-EEEbxbaxxa
1eje_A_411eje   A4450APFSFTMEEE-SEEbxbaxbb
1elj_A_1071elj   A107112.HYYALP.EE-EEE.bxabbx
1euc_B_2151euc   B216222VVCFDAKEEE--EEbbxabbb
1g2i_A_471g2i   A4853VKVDLT.EEE-EE.bxxabx.
1g9m_G_4201g9m   G420425.IKQIIN.EESEEE.xbabbb
1gmu_A_21gmu   A27LYLTQR.EEE-EE.xbxabb.
1h65_A_1191h65   A119124.TIDVLL.EE-EEE.bxabbb
1hkk_A_2601hkk   A263269GMPTYGREEESEEExbxabbb
1hsj_A_1021hsj   A102107.KLIAYP.EE-EEE.bxabxx
1htr_B_1921htr   B193199IGIEEFLEEE-EEEbxbabbb
1i0r_A_231i0r   A2733QIANTVFEEES-EEbxbaxbb
1itx_A_3311itx   A334340GVPFYGREEESEEExbxabbb
1iu8_A_731iu8   A7480SVERVAVEEE-EEEbbxabbb
1j7x_A_2551j7x   A258264TVPIINFEEE-EEExbxabbb
1jnd_A_2721jnd   A275281GVATYGNEEESEEExbbabbx
1jr2_A_1621jr2   A164170SITVYQTEEE-EEExbxabbx
1jr2_A_291jr2   A3238LIPVLSFEEE-EEEbbxabbb
1k3i_A_1391k3i   A139144.SIAEIN.EESEEE.bbabbb
1kek_A_2971kek   A300306IKVRLYREEESEEEbxxaxab
1kfw_A_3211kfw   A324330GLAAYGREEESEEExbbabbb
1ln1_A_1501ln1   A150156IRVKQYKEEE--EExxxabbb
1mda_H_3111mda   H314320HDSDAIIEEE-EEEbxxabbb
1mdw_A_1481mdw   A153159VVDDRLPEEES-EEbbxaxbw
1mnn_A_1481mnn   A148154LRVQYFAEE--EEEbxxabxb
1nvr_A_1531nvr   A153157.TVFRY..EE-EE..bxabb.
1ocx_A_1071ocx   A107112HIYTAT.EEE-EE.bbbaxb.
1oew_A_2881oew   A289295CFGGIQSEEESEEEbxxabbx
1ojx_A_751ojx   A7681ILKLNG.EEE-EE.xxxabb.
1ow1_A_35471ow1   A35473553LRIAQRMEEE-EEExxxabbb
1p3c_A_1461p3c   A150155GSVTRE.EE--EE.bxxabb.
1pfv_A_2291pfv   A229234.WDISRD.EE-EEE.bxabbx
1pmi_*_451pmi   -4550.PYAELW.EE-EEE.wbabbx
1q3q_A_3451q3q   A345351GYAEVVEEEESEEEbbbabbb
1qf5_A_3401qf5   A342348KLCVAYREEE-EEEbbpabbb
1qw9_A_4051qw9   A405410.VPYLES.EESEEE.xxaxbb
1reg_X_311reg   X3238LYQSCHIEEE-EEEbxxabbb
1s2b_A_1891s2b   A189194.QDVTDC.EE-EEE.bxabbx
1usc_A_311usc   A3541CPAVWNTEEESSEEbxbaxbb
2tgi_*_782tgi   -7884CVSQDLEEEE-SEExbpabbb
2viu_A_392viu   A3944ATELVQ.EEE-EE.bbxabx.
3mbp_*_1023mbp   -102107.KLIAYP.EE-SEE.xxabxx
3thi_A_1043thi   A104109.EVYGLP.EE--EE.bxabbp
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkc_A_3821bkc   A     INN3,N(D,L-[2-(HYDROXYAMINO-CARBONYL)METHYL]-4-METHYL PENTANOYL)L-3-(TERT-BUTYL)GLYCYL-L-ALANINE N - 389
1eje_A_411eje   A     NINICKEL (II) ION N - 42
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE N - 42
1eje_A_411eje   A     NINICKEL (II) ION A - 43
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE A - 43
1eje_A_411eje   A     NINICKEL (II) ION A - 44
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE A - 44
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE P - 45
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE F - 46
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE S - 47
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE F - 48
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE T - 49
1elj_A_1071elj   A     GLCGLUCOSE E - 116
1g9m_G_4201g9m   G     IOH2-PROPANOL, ISOPROPANOL I - 424
1g9m_G_4201g9m   G     IOH2-PROPANOL, ISOPROPANOL N - 425
1h65_A_1191h65   A     MSESELENOMETHIONINE L - 123
1h65_A_1191h65   A     MSESELENOMETHIONINE L - 124
1h65_A_1191h65   A     MSESELENOMETHIONINE Y - 125
1h65_A_1191h65   A     MSESELENOMETHIONINE V - 126
1h65_A_1191h65   A     MSESELENOMETHIONINE D - 127
1hkk_A_2601hkk   A     NAAN-ACETYL-D-ALLOSAMINE Y - 267
1hkk_A_2601hkk   A     AMIALLOSAMIZOLINE Y - 267
1hkk_A_2601hkk   A     NAAN-ACETYL-D-ALLOSAMINE R - 269
1hkk_A_2601hkk   A     AMIALLOSAMIZOLINE R - 269
1hsj_A_1021hsj   A     GLCGLUCOSE E - 111
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE C - 25
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE G - 26
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE Q - 27
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE I - 28
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE A - 29
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE N - 30
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE T - 31
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE V - 32
1itx_A_3311itx   A     GOLGLYCEROL W - 342
1itx_A_3311itx   A     GOLGLYCEROL D - 343
1j7x_A_2551j7x   A     MSESELENOMETHIONINE I - 261
1j7x_A_2551j7x   A     MSESELENOMETHIONINE I - 262
1k3i_A_1391k3i   A     CACALCIUM ION I - 140
1k3i_A_1391k3i   A     CACALCIUM ION A - 141
1k3i_A_1391k3i   A     CACALCIUM ION E - 142
1kfw_A_3211kfw   A     GOLGLYCEROL Y - 328
1kfw_A_3211kfw   A     GOLGLYCEROL R - 330
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Y - 155
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Q - 157
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE L - 159
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE A - 160
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE I - 161
1ocx_A_1071ocx   A     PBMTRIMETHYL LEAD ION A - 111
1ocx_A_1071ocx   A     PBMTRIMETHYL LEAD ION T - 112
1oew_A_2881oew   A     GOLGLYCEROL C - 289
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE N - 33
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE F - 34
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE C - 35
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE P - 36
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE A - 37
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE V - 38
1usc_A_311usc   A     ACTACETATE ION V - 38
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE W - 39
1usc_A_311usc   A     ACTACETATE ION W - 39
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE N - 40
2viu_A_392viu   A     NAGN-ACETYL-D-GLUCOSAMINE A - 39
2viu_A_392viu   A     NAGN-ACETYL-D-GLUCOSAMINE T - 40
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hkk_A_2601hkk   A AC2NAA BINDING SITE FOR CHAIN AY - 267
1hkk_A_2601hkk   A AC4NAA BINDING SITE FOR CHAIN AR - 269
1ocx_A_1071ocx   A AC3PBM BINDING SITE FOR CHAIN AA - 111
1oew_A_2881oew   A AC3GOL BINDING SITE FOR CHAIN AC - 289
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AN - 33
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AC - 35
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AP - 36
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AW - 39
3thi_A_1043thi   A NUCCYS 113 IS THE ACTIVE SITE NUCLEOPHILE.C - 113

Clusters included in this Subclass
CLUSTER: AR.0.2
CLUSTER: AR.1.17
CLUSTER: AR.1.5
CLUSTER: AR.2.11
CLUSTER: AR.2.30