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Information on SUBCLASS 2.2.2
Subclass Accession number: 1649
Subclass: 2.2.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>50 %)  3.2.1 (>50 %)  3.2.1.1
GO : GO:0004553 (>75 %)  GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0016160 (>75 %)  GO:0016160 (>75 %)  GO:0016798 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51350 (>75 %)  51350 (>75 %)  51445 (>75 %)  51445 (>75 %)  51446 (>75 %)  51446 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 11.9 +/- 13.5
Average RMSD (Å) : 0.767 +/- 0.186

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XpXXXh
(φψ)-conformation: bblpbb
Pattern: x[CGSTV][HKRSTW][EGQ][adsv]x[fgv][DGST][gnsv]
Conservation:-1.053-0.065-0.4092.247-0.199-0.571-0.3770.946-0.519
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ep0_A_491ep0   A5563SVRGVLRGLEETTBEEEEbxpvxbbew
1juh_A_941juh   A98106LSSGDYGSVEETT-EEEExbpvxbbbb
1l0s_A_361l0s   A3644TCTGSRFDGEEES-EEEEbbblbbbbv
1oh4_A_221oh4   A2634GTWQAEFGSEEES-EEEEebblbbxxb
1tyv_*_4411tyv   -444452DGKGMYVSNEEES-EEEEbebvxbbbl
1tyv_*_4631tyv   -466474LTHESVFTNEEES-EEEEabblbbbbl
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1juh_A_941juh   A     NAGN-ACETYL-D-GLUCOSAMINE V - 97
1juh_A_941juh   A     CUCOPPER (II) ION V - 106
1l0s_A_361l0s   A     TYI3,5-DIIODOTYROSINE C - 37
1l0s_A_361l0s   A     TYI3,5-DIIODOTYROSINE S - 40
1l0s_A_361l0s   A     TYI3,5-DIIODOTYROSINE R - 41
1l0s_A_361l0s   A     CDCADMIUM ION R - 41
1l0s_A_361l0s   A     TYI3,5-DIIODOTYROSINE F - 42
1l0s_A_361l0s   A     CDCADMIUM ION F - 42
1l0s_A_361l0s   A     TYI3,5-DIIODOTYROSINE D - 43
1oh4_A_221oh4   A     GOLGLYCEROL W - 22
1oh4_A_221oh4   A     GOLGLYCEROL W - 23
1oh4_A_221oh4   A     GOLGLYCEROL N - 24
1oh4_A_221oh4   A     BMABETA-D-MANNOSE S - 25
1oh4_A_221oh4   A     BMABETA-D-MANNOSE G - 26
1oh4_A_221oh4   A     BMABETA-D-MANNOSE T - 27
1oh4_A_221oh4   A     BMABETA-D-MANNOSE W - 28
1oh4_A_221oh4   A     GLAALPHA D-GALACTOSE W - 28
1oh4_A_221oh4   A     GOLGLYCEROL D - 36
1oh4_A_221oh4   A     GOLGLYCEROL I - 37
1oh4_A_221oh4   A     GOLGLYCEROL E - 38
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oh4_A_221oh4   A AC8GOL BINDING SITE FOR CHAIN AW - 22
1oh4_A_221oh4   A AC6GLA BINDING SITE FOR CHAIN AW - 28
1oh4_A_221oh4   A AC6GLA BINDING SITE FOR CHAIN AS - 34
1oh4_A_221oh4   A AC8GOL BINDING SITE FOR CHAIN AD - 36
1oh4_A_221oh4   A AC8GOL BINDING SITE FOR CHAIN AI - 37

Clusters included in this Subclass
CLUSTER: AR.2.62