ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.8.3

Subclass Accession number: 1675
Subclass: 2.8.3

Type: AR beta-beta link
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.2 (>50 %)  3.2.1 (>50 %)  3.2.1.8
GO : GO:0004553 (>75 %)  GO:0016798 (>75 %)
SCOP : 51350 (>75 %)  51445 (>75 %)  51487 (>75 %)

Number of loops: 2

Average sequence ID (%) : 10.0 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 0-45

theta (°): 45-90

rho (°): 45-90

Consensus Sequence:	XhXPhp
(φψ)-conformation:	pbpwbp

Pattern:	[AV]	[HP]	[IV]	[EL]	[P]	[MY]	[QT]	[EH]	[LY]	[SY]
Conservation:	-0.462	-0.015	0.432	-1.208	2.520	-0.164	-0.462	0.283	-0.313	-0.611

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1gl4_A_534	1gl4	A	535	544	VHIEPYTELY	EE---EEEEE	bbbxwbbbbb
1qla_A_362	1qla	A	362	371	APVLPMQHYS	EEE--EEEEE	xwbbwbpabb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1qla_A_362	1qla	A	FADFLAVIN-ADENINE DINUCLEOTIDE	H - 369
1qla_A_362	1qla	A	FADFLAVIN-ADENINE DINUCLEOTIDE	Y - 370
1qla_A_362	1qla	A	CACALCIUM ION	Y - 370
1qla_A_362	1qla	A	CACALCIUM ION	S - 371

Clusters included in this Subclass

CLUSTER: AR.2.145