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Information on SUBCLASS 2.7.1
Subclass Accession number: 168
Subclass: 2.7.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 16.7 +/- 17.7
Average RMSD (Å) : 0.544 +/- 0.182

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhpGpX
(φψ)-conformation: aaplbb
Pattern: [aiklm][adeknqrt]x[afilmvw]x[DGNS][aknqr][dehkrst][fhilvy]
Conservation:-0.641-0.369-0.900-0.030-0.2242.4500.320-0.6920.087
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2n_A_6961d2n   A703711AQQVKGKKVHHHHTTSEEaaaapgxxb
1ex2_A_861ex2   A93101LRRLSGRSHHHHHTTSEEaaaaplbbb
1fr2_B_361fr2   B3947ADKLRDKEFHHHHTT-EEaaaapvxxb
1g24_A_1521g24   A159167KAKFLNKDRHHHHTT-EEaaaapvbxb
1giq_A_3161giq   A323331KEKWEGKVIHHHHTT-EEaaaaxvxbb
1j54_A_791j54   A8795MDYIRGAELHHHHTTSEEaaaapvxxx
1jdr_A_2551jdr   A268275KLLENGIT.HHHHTTEE.aaaapvbx.
1lst_*_1061lst   -106114LESLKGKHVHHHHTT-EEaaaapvxbb
1m1n_B_3421m1n   B359367HTWLHGKRFHHHHTT-EEaaaapvxbb
1oal_A_1141oal   A114122LKELKGHAIHHHHTT-EEaaaapvxbb
1ojq_A_1161ojq   A123131NNLMNSRIYHHHHTT-EEaaaaxvbxb
1oo0_B_1241oo0   B131139KEALNGAEIHHHHTT-EEaaaaxvxbb
1qhd_A_281qhd   A3846IITMNGNEFHHHHTT-EEaaaapvxbb
1qo0_A_2441qo0   A244252SDVAEGQVVHHHHTT-EEaaaapvxbb
1qs1_A_1671qs1   A174182KEQFLDRDIHHHHTTSEEaaaaxvbbb
2scu_B_662scu   B7381AENWLGKRLHHHHTTSEEaaaapvxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d2n_A_6961d2n   A     GOLGLYCEROL D - 696
1d2n_A_6961d2n   A     GOLGLYCEROL K - 697
1d2n_A_6961d2n   A     GOLGLYCEROL E - 698
1d2n_A_6961d2n   A     GOLGLYCEROL T - 700
1ex2_A_861ex2   A     PO4PHOSPHATE ION Q - 110
1giq_A_3161giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 332
1giq_A_3161giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 333
1j54_A_791j54   A     EGLETHYLENE GLYCOL G - 92
1j54_A_791j54   A     EGLETHYLENE GLYCOL A - 93
1j54_A_791j54   A     MNMANGANESE (II) ION I - 97
1jdr_A_2551jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 262
1jdr_A_2551jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 266
1jdr_A_2551jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 269
1m1n_B_3421m1n   B     CACALCIUM ION D - 353
1m1n_B_3421m1n   B     CACALCIUM ION M - 354
1m1n_B_3421m1n   B     CACALCIUM ION T - 356
1m1n_B_3421m1n   B     CACALCIUM ION D - 357
1oal_A_1141oal   A     CUCOPPER (II) ION M - 123
1oal_A_1141oal   A     CUCOPPER (II) ION I - 124
1oal_A_1141oal   A     CUCOPPER (II) ION H - 125
1oo0_B_1241oo0   B     GOLGLYCEROL N - 135
1qhd_A_281qhd   A     CACALCIUM ION Q - 47
2scu_B_662scu   B     COACOENZYME A K - 66
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oal_A_1141oal   A AC2CU BINDING SITE FOR CHAIN AH - 125

Clusters included in this Subclass
CLUSTER: HE.2.19