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Information on SUBCLASS 3.2.4
Subclass Accession number: 1690
Subclass: 3.2.4 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 8.9 +/- 11.4
Average RMSD (Å) : 0.860 +/- 0.107

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbabpbb
Pattern: x[cfgimvy]x[fhiv][cdhkqst][ADEGK]xxxx
Conservation:0.911-0.998-1.3250.015-1.2271.636-0.3320.365-0.0410.996
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1erj_A_6221erj   A626635YIGHKDFVLSEE--SS-EEExbNxabpxab
1ii7_A_2011ii7   A204213LGHIHKRYETEES-SS-EEEbbgxaxpbbb
1iz5_A_1881iz5   A188197DIEVQEETKSEEEESS-EEEbbbbabpbbb
1j58_A_911j58   A94103LHWHKEAEWAEEEESS-EEEpbbbaxxbbb
1li1_A_1071li1   A110119VCEAPAMVMAEEEESS-EEEbbxbabpbbb
1p35_A_431p35   A4655MFNISGPIRSEEEESS-EEEbbxbabxxab
1rwz_A_581rwz   A5867VYNIDEEKTIEEEESS-EEEbbbbabxbbb
1tbg_A_1751tbg   A180189FTGHTGDVMSEE--SS-EEEbbNxabpxab
1tul_*_841tul   -8695IMFNCAEIKLEEEESS-EEEbbbxabxxbb
1uxy_*_521uxy   -5260.VLFLEDYRG.EEE-S-EEE.bbxabpxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ii7_A_2011ii7   A     MNMANGANESE (II) ION G - 205
1ii7_A_2011ii7   A     MNMANGANESE (II) ION H - 206
1ii7_A_2011ii7   A     1012'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE H - 206
1ii7_A_2011ii7   A     MNMANGANESE (II) ION I - 207
1ii7_A_2011ii7   A     1012'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE I - 207
1ii7_A_2011ii7   A     MNMANGANESE (II) ION H - 208
1ii7_A_2011ii7   A     1012'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE H - 208
1ii7_A_2011ii7   A     1012'-DEOXY-ADENOSINE 3'-MONOPHOSPHATE K - 209
1j58_A_911j58   A     MSESELENOMETHIONINE R - 92
1j58_A_911j58   A     MNMANGANESE (II) ION R - 92
1j58_A_911j58   A     FMTFORMIC ACID R - 92
1j58_A_911j58   A     MNMANGANESE (II) ION H - 95
1j58_A_911j58   A     FMTFORMIC ACID H - 95
1j58_A_911j58   A     MNMANGANESE (II) ION W - 96
1j58_A_911j58   A     MNMANGANESE (II) ION H - 97
1j58_A_911j58   A     FMTFORMIC ACID H - 97
1j58_A_911j58   A     MNMANGANESE (II) ION E - 101
1j58_A_911j58   A     FMTFORMIC ACID E - 101
1j58_A_911j58   A     MSESELENOMETHIONINE A - 103
1uxy_*_521uxy   *     FADFLAVIN-ADENINE DINUCLEOTIDE V - 52
1uxy_*_521uxy   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 65

Clusters included in this Subclass
CLUSTER: AR.4.35
CLUSTER: AR.5.156