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Information on SUBCLASS 3.3.1
Subclass Accession number: 1703
Subclass: 3.3.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 76

Average sequence ID (%) : 18.1 +/- 18.0
Average RMSD (Å) : 0.455 +/- 0.140

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hXXGpXh
(φψ)-conformation: bbpgpbb
Pattern: x[acfgilmvy]xx[DEGKNQS][adegknqrst]x[acfgiklmtv]x
Conservation:-0.6510.668-0.555-0.2952.360-0.147-0.7230.121-0.777
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b0u_A_191b0u   A2836QARAGDVISEE-TT-EEEbbxpvxbbb
1bd0_A_2531bd0   A256263KLQPGEKV.EE-TT-EE.bxbpgxbb.
1bu8_A_3691bu8   A375383SLKPEARHVEE-TT-EEExbbpvxbbb
1cb8_A_5021cb8   A503511KTGRGKITTEE-TT-EEEbxxxvbbbb
1cx4_A_1691cx4   A172180LVKEGEHVIEE-TT-EEExbxpvxxab
1cx4_A_2911cx4   A294302VYNDGEQIIEE-TT-EEEbbxpvxxab
1d2e_A_2831d2e   A283291ILKKGDECEEEETT-EEEbbbpvxxbb
1d2e_A_3151d2e   A315323RAEAGDNLGEEETT-EEEbbbpvxxbb
1dar_*_3341dar   -334342TLTSGSYVYEEESS-EEEbbbpvbbbb
1dar_*_3681dar   -368376ELKAGDLGAEEETT-EEEbbxpvbbbb
1e5d_A_1211e5d   A123131VVKHGETLSEE-TT-EEExbbpvxbbx
1e79_D_1461e79   D146153.YAKGGKIG.EETT-EEE.xbxvxxbb
1ex0_A_6731ex0   A682690EIRPNSTVQEE-TT-EEEbbppvxbbb
1exm_A_2461exm   A246254KVKVGDEVEEEETT-EEEbbbpgxxbb
1exm_A_2791exm   A279287EGIAGDNVGEEETT-EEEbbbpgxbbb
1eyq_A_1431eyq   A143151NFPPGASVFEE-TT-EEEbbxpgxbbb
1fwx_A_5021fwx   A504512TVKEGDEVTEEETT-EEEbbbpvxxxb
1g6h_A_291g6h   A2937SVNKGDVTLEEETT-EEEbbxpvxxxb
1g97_A_3361g97   A336344SLGAQVHIGEE-TT-EEEbbxpvxbbx
1gtf_A_321gtf   A3745KLDKGEVLIEE-TT-EEExbxpvxbbb
1gtt_A_1821gtt   A182190EIQPGDRVREE-TT-EEExbbpvxbbb
1h2k_A_2601h2k   A264272VVGPGDVLYEE-TT-EEEbxbpgxbbx
1hn0_A_8091hn0   A812820TLQQGDWLIEE-TT-EEEbbbpvxbbb
1hs6_A_861hs6   A93101ALSKNQEIVEE-TT-EEExbbpUxbbb
1i5z_A_191i5z   A2230KYPSKSTLIEE-TT-EEEbbxpvxxab
1is3_A_41is3   A1018PFKLGMYLTEEETT--EEpxbpvxbbb
1itw_A_2071itw   A215223SVQAGEIIDEE-TT-EEExbbxvxbbb
1j1t_A_1351j1t   A142150TMTSGETFNEEETT-EEEbbbpgxbbx
1jer_*_311jer   -3138.FRVGDSLQ.EETT-EEE.bbpgxbbb
1ji0_A_181ji0   A2735KVPRGQIVTEEETT-EEEbbxpvbbbb
1jj2_J_121jj2   J1219.LEKGSLIT.EETT-EEE.bbxvxbbx
1jpz_A_3451jpz   A346354PLEKGDELMEE-TT-EEEwbbpvxxbb
1juh_A_2931juh   A294302ELGSGDVAFEE-TT-EEExbbpvxbbb
1jva_A_2851jva   A285292.FAKGTNVL.EETT-EEE.bxxvpxbx
1kbl_A_4881kbl   A489497TFAEGDYISEEETT-EEExbbpgxxbb
1kmt_A_1021kmt   A103111VLKEGVEYREEETT-EEExbxpvxxbb
1ktj_A_271ktj   A2836IIHRGKPFQEEETTSEEExbxpvbxbx
1lm8_V_1061lm8   V110118HSYRGHLWLEEETT-EEEbbbpvxbbb
1lrh_A_881lrh   A9199PFFQNTTFSEE-TT-EEEwbbpvbbbb
1ly2_A_211ly2   A2128.IAVGTVIR.EETT-EEE.xxxgxbbb
1ly2_A_881ly2   A8895.YRHGDSVT.EETT-EEE.xxpvxbbb
1mjs_A_3311mjs   A332340KIPPGCNLKEE-TT-EEEbbxpvxbbx
1n0u_A_4041n0u   A404412TVKSGQKVREEETT-EEEbxbxvbxbb
1n0u_A_4471n0u   A447455DCPAGNIIGEEETT-EEEbbxpgbbbb
1n0w_A_1171n0w   A117123.IETGSIT..EETTSEE..xxxvbxb.
1ne6_A_1521ne6   A155163SFIAGETVIEE-TT-EEEbbbpvxbab
1ne6_A_2701ne6   A273281QFEDGQKIVEE-TT-EEEbbbpvxxab
1nlf_A_271nlf   A2734.MVAGTVGA.EETTSEEE.bxxvbbbb
1nxj_A_1391nxj   A140148TFVPGDIAYEE-TTSEEEbxbpgxbbb
1o4t_A_841o4t   A8795PIKAGDVCFEEETT-EEEwbbpvxbbb
1o4t_A_931o4t   A95103FTDSGESHSEE-TT-EEEbbxpvxbbb
1o5l_A_111o5l   A1422VFRKGEIVKEE-TT-EEEbbxpvxxab
1o5u_A_571o5u   A5967VIEKGDLVTEEETT-EEEbbbpvxbbb
1o7f_A_3921o7f   A396403TLHEGDDF.EEETT-EE.bbbpgxbb.
1ofn_A_1111ofn   A113121YLPVGVGHAEE-TT-EEExbxpvxxbb
1ok3_A_231ok3   A2330.FPEDTVIT.EETT-EEE.bxpvxbbb
1oke_A_201oke   A2432VLEHGSCVTEE-TT-EEEbbbpvbbbb
1oru_A_1681oru   A169177AVYTGDEIEEEETT-EEExbbpvpxbb
1pe9_A_2721pe9   A273281GIGTSGSVLEE-TT-EEEbxxpUxbbb
1pmi_*_2661pmi   -270278GLNKGEAMFEE-TT-EEEbbxxvxbbb
1pmi_*_4031pmi   -404412KIDTGYVFFEEETT-EEExbxpvxbbx
1poc_*_401poc   -4047VMSAGESK.EE-TT-EE.bbxpvxbb.
1q3e_A_5341q3e   A537545VFQPGDYIIEE-TT-EEEbbbpvxxab
1q3e_A_5711q3e   A573580KLSDGSYF.EE-TT-EE.bbbpvbbb.
1qcs_A_1291qcs   A129137AFSVGQQLVEEETT-EEExbbxvxbbb
1qqr_A_1831qqr   A187195TLAIGDTITEE-TT-EEEbbbpgxbbb
1qwr_A_2841qwr   A287295PLKKGDHFIEEETT-EEEObbpgxbbb
1qxr_A_1171qxr   A121129SMEPGTVVYEE-TT-EEExbbpgxbbx
1qxr_A_1271qxr   A129137YVPPYWAHREE-TT-EEExxxpvxxbb
1r0w_A_4391r0w   A447455NIEKGEMLAEE-TT-EEEbbxpvxbbb
1vj2_A_751vj2   A7785TVEEGFYIFEEETT-EEExbbpgxbbb
2arc_A_622arc   A6573VCRPGDILLEE-TT-EEExbbpgxbbb
2arc_A_712arc   A7381LFPPGEIHHEE-TT--EEbbxpvxxbb
2fcb_A_202fcb   A2028NVLQEDSVTEEETT-EEEbbbpvxxbb
2reb_*_562reb   -5663.LPMGRIVE.EETTSEEE.xxxvbxbb
2viu_A_2292viu   A236244IVKPGDVLVEE-TT-EEEbbxpvxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b0u_A_191b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE H - 19
1b0u_A_191b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 21
1cx4_A_1691cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 180
1cx4_A_2911cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 302
1e79_D_1461e79   D     ADPADENOSINE-5'-DIPHOSPHATE G - 156
1eyq_A_1431eyq   A     NARNARINGENIN Y - 152
1gtf_A_321gtf   A     TRPTRYPTOPHAN H - 33
1gtf_A_321gtf   A     TRPTRYPTOPHAN H - 34
1gtf_A_321gtf   A     TRPTRYPTOPHAN S - 35
1gtf_A_321gtf   A     TRPTRYPTOPHAN E - 36
1gtf_A_321gtf   A     TRPTRYPTOPHAN L - 44
1gtf_A_321gtf   A     TRPTRYPTOPHAN A - 46
1gtf_A_321gtf   A     TRPTRYPTOPHAN Q - 47
1h2k_A_2601h2k   A     FE2FE (II) ION I - 273
1h2k_A_2601h2k   A     OGAN-OXALYOLGLYCINE I - 273
1hs6_A_861hs6   A     YBYTTERBIUM (III) ION E - 107
1i5z_A_191i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 30
1ji0_A_181ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE I - 18
1ji0_A_181ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE A - 20
1ji0_A_181ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE I - 21
1jpz_A_3451jpz   A     140N-PALMITOYLGLYCINE E - 352
1jpz_A_3451jpz   A     140N-PALMITOYLGLYCINE M - 354
1juh_A_2931juh   A     EDO1,2-ETHANEDIOL L - 295
1juh_A_2931juh   A     EDO1,2-ETHANEDIOL G - 296
1juh_A_2931juh   A     EDO1,2-ETHANEDIOL S - 297
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE I - 109
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 110
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE S - 111
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE Y - 112
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 115
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE W - 117
1lrh_A_881lrh   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 94
1lrh_A_881lrh   A     NAGN-ACETYL-D-GLUCOSAMINE N - 95
1lrh_A_881lrh   A     ZNZINC ION I - 100
1n0w_A_1171n0w   A     MSESELENOMETHIONINE I - 117
1n0w_A_1171n0w   A     MGMAGNESIUM ION I - 117
1n0w_A_1171n0w   A     MGMAGNESIUM ION E - 118
1n0w_A_1171n0w   A     EDO1,2-ETHANEDIOL I - 122
1n0w_A_1171n0w   A     MSESELENOMETHIONINE T - 123
1ne6_A_1521ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL I - 163
1ne6_A_2701ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 281
1o4t_A_931o4t   A     MNMANGANESE (II) ION H - 102
1o4t_A_931o4t   A     OXLOXALATE ION H - 102
1oru_A_1681oru   A     MSESELENOMETHIONINE T - 172
1oru_A_1681oru   A     MSESELENOMETHIONINE I - 176
1oru_A_1681oru   A     MSESELENOMETHIONINE E - 177
1oru_A_1681oru   A     MSESELENOMETHIONINE V - 178
1oru_A_1681oru   A     MSESELENOMETHIONINE H - 179
1pmi_*_2661pmi   *     ZNZINC ION L - 279
1poc_*_401poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE V - 40
1q3e_A_5341q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE I - 545
1q3e_A_5711q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE M - 572
1q3e_A_5711q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE L - 574
1q3e_A_5711q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE Y - 579
1q3e_A_5711q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE F - 580
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 130
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 138
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 140
1qwr_A_2841qwr   A     MSESELENOMETHIONINE L - 296
1qxr_A_1271qxr   A     NINICKEL (II) ION H - 136
1qxr_A_1271qxr   A     PA55-PHOSPHOARABINONIC ACID H - 136
1qxr_A_1271qxr   A     PA55-PHOSPHOARABINONIC ACID R - 137
1qxr_A_1271qxr   A     PA55-PHOSPHOARABINONIC ACID T - 138
2arc_A_712arc   A     ARAALPHA-L-ARABINOSE H - 80
2arc_A_712arc   A     ARAALPHA-L-ARABINOSE Y - 82
2viu_A_2292viu   A     NAGN-ACETYL-D-GLUCOSAMINE V - 242
2viu_A_2292viu   A     NAGN-ACETYL-D-GLUCOSAMINE V - 244
2viu_A_2292viu   A     NAGN-ACETYL-D-GLUCOSAMINE N - 246
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gtf_A_321gtf   A AC1TRP BINDING SITE FOR CHAIN AQ - 47

Clusters included in this Subclass
CLUSTER: AR.2.9
CLUSTER: AR.3.4
CLUSTER: AR.3.56
CLUSTER: AR.4.2
CLUSTER: AR.4.56
CLUSTER: AR.4.63
CLUSTER: AR.5.77