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Information on SUBCLASS 3.5.2
Subclass Accession number: 1724
Subclass: 3.5.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 10.1 +/- 14.2
Average RMSD (Å) : 0.600 +/- 0.145

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XhXXXXX
(φψ)-conformation: bbpplbb
Pattern: xxx[adegpqt][gknqs][adegkqrst]xx
Conservation:-0.8720.355-0.6750.6442.095-0.339-0.669-0.540
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ahs_A_1571ahs   A161168CMDAGAAGEE-TTEEExbxxlbbb
1amu_A_3501amu   A350357APIQNTQIEE-TTEEEbpxpvbbb
1aoz_A_2061aoz   A207214HVSPKKTYEE-TT-EEbbxplbbb
1aoz_A_4191aoz   A420427QFKIGEVVEE-TT-EEbbxxgxxb
1aoz_A_4821aoz   A484491VIFPYGWTEE-TTEEEbbxplbbb
1bf2_*_7361bf2   -738745GQCGQSLLEE-SSEEExxxxlbbb
1dgw_A_861dgw   A9299CSKPNTLLEE-TTEEEbbxplbbx
1gtt_A_2571gtt   A257264LTGDNQTSEE-TTEEExbxxlbbb
1gw0_A_2161gw0   A218225TLTPGKRHEE-TT-EEbxxpvbxb
1h03_P_291h03   P3340SCNTGYKLEE-TTEEEbbxpgbbx
1hdf_A_491hdf   A5158KVGPNTKAEE-TTEEEbbxxlbbb
1hdf_A_701hdf   A7279RLEESSQVEE-TTEEExbxplbbb
1ji1_A_6231ji1   A626633AVDGHYGAEE-TTEEExbxxlbbb
1kbv_A_2631kbv   A265272IVPAGGSAEE-TTEEExbpxvbbb
1klo_*_1011klo   -101108RCKEGFFGEE-TTEEEbbpxvbbe
1klo_*_441klo   -4451LCDDGYFGEE-TTEEEbxxpvbbe
1kwg_A_6331kwg   A633640RVGPYDLAEE-TTEEExxxxvbbb
1lk9_A_401lk9   A4046ECNTCYT.EE-TTEE.bxxpvbb.
1od5_A_461od5   A5158TLNRNGLHEE-TTEEEbbxpvxbx
1q8i_A_2641q8i   A267274AQAKGRLIEEBTTBEExbbpvbxb
1row_A_491row   A5158FVDPSGSKEE-TTEEEbbxplbbb
1tgo_A_2481tgo   A250257VEVKGRIHEE-TTSEExbbpgbbx
1zxq_*_111zxq   -1320AVEPKGSLEE-TTEEEbbxpvxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE N - 216
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE V - 217
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE T - 218
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE L - 227
1hdf_A_491hdf   A     MSESELENOMETHIONINE V - 50
1hdf_A_491hdf   A     MSESELENOMETHIONINE A - 58
1hdf_A_491hdf   A     MSESELENOMETHIONINE F - 59
1hdf_A_491hdf   A     CACALCIUM ION F - 59
1hdf_A_491hdf   A     MSESELENOMETHIONINE I - 60
1hdf_A_491hdf   A     CACALCIUM ION I - 60
1hdf_A_491hdf   A     MSESELENOMETHIONINE F - 61
1hdf_A_491hdf   A     CACALCIUM ION F - 61
1kbv_A_2631kbv   A     CUCOPPER (II) ION G - 269
1od5_A_461od5   A     CO3CARBONATE ION R - 50
1od5_A_461od5   A     CO3CARBONATE ION L - 52
1od5_A_461od5   A     CO3CARBONATE ION H - 58
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE K - 11
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE K - 17
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE N - 23
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE C - 24
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE S - 25
1zxq_*_111zxq   *     NAGN-ACETYL-D-GLUCOSAMINE T - 26
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_2161gw0   A BC6NAG BINDING SITE FOR CHAIN AN - 216
1gw0_A_2161gw0   A BC6NAG BINDING SITE FOR CHAIN AT - 218
1od5_A_461od5   A AC1CO3 BINDING SITE FOR CHAIN AR - 50
1od5_A_461od5   A AC1CO3 BINDING SITE FOR CHAIN AH - 58

Clusters included in this Subclass
CLUSTER: AR.2.122
CLUSTER: AR.2.28
CLUSTER: AR.3.32