Information on SUBCLASS 3.6.2 |
Subclass Accession number: 1731
Subclass: 3.6.2 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) 3.2.1.21 GO : GO:0004553 (>50 %) GO:0015926 (>50 %) GO:0016798 (>50 %) SCOP : 51350 (>50 %) 51445 (>50 %) 51521 (>50 %) |
Number of loops: 23 Average sequence ID (%) : 14.0 +/- 15.4 Average RMSD (Å) : 0.735 +/- 0.244 Consensus geometry
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Consensus Sequence: | XhXXGXX |
(φψ)-conformation: | bbppgbb |
Pattern: | x | [ciltvwy] | x | [ACFILMV] | x | [adegps] | [dgn] | x | x | [afgilmpvy] | x |
Conservation: | -1.000 | -0.296 | -0.346 | 0.574 | -0.415 | -0.339 | 2.488 | -0.584 | -0.716 | -0.365 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ayo_A_44 | 1ayo | A | 47 | 56 | DVKMVSGFIP. | EEE--TTEEE. | bbxxxpvbbx. |
1b12_A_260 | 1b12 | A | 260 | 270 | TWIVPPGQYFM | EEE--TTEEEE | bbbxxpvbbbb |
1chd_*_224 | 1chd | - | 225 | 235 | AYIAPGDKHME | EEE--TTSEEE | bbbpxxvbxbb |
1ci9_A_239 | 1ci9 | A | 239 | 248 | .VRMRDGIEVP | .EE--TTEEEE | .bxxbxvxbbp |
1dx5_I_368 | 1dx5 | I | 369 | 379 | LCVCAEGFAPI | EEE--TTEEEE | bxbbxxvbbpx |
1dx5_I_407 | 1dx5 | I | 407 | 416 | .CECPEGYILD | .EE--TTEEEE | .bbbxpvbbxb |
1ef8_A_50 | 1ef8 | A | 52 | 62 | ILRAPSGSKVF | EEE--TT-SEE | bbbbppvpaba |
1fjs_L_106 | 1fjs | L | 108 | 117 | VCSCARGYTL. | EEE--TTEEE. | bbbbxxgbbx. |
1h6f_A_220 | 1h6f | A | 220 | 229 | .TILNSMHKYQ | .EE--TTEEEE | .xxbxxvbbbb |
1h80_A_97 | 1h80 | A | 97 | 106 | .IQMKSNVHIR | .EE--TTEEEE | .xbxbplbbxb |
1iv8_A_685 | 1iv8 | A | 686 | 696 | KLKLEEGAIYT | EEE--SS-EEE | bbxxxxgpbbb |
1jgt_A_185 | 1jgt | A | 185 | 194 | .YQVPAGAVMD | .EE--TTEEEE | .bbxpxlbbxb |
1jr7_A_273 | 1jr7 | A | 274 | 284 | SVPVPVGKFLL | EE---TT-EEE | bbwbxpvbbxb |
1kli_L_109 | 1kli | L | 111 | 120 | SCRCHEGYSL. | EEE--TTEEE. | bxbbxpvbbx. |
1l5p_A_10 | 1l5p | A | 13 | 21 | QLKFEDDQT.. | EEE--TTEE.. | xbxbbpvxx.. |
1lml_*_533 | 1lml | - | 533 | 542 | .TNCTPGLRVE | .EE--TT-EEE | .bpbxpgxbbx |
1nps_A_40 | 1nps | A | 40 | 50 | SVKVPPGVKAI | EEE--TTEEEE | bbbbxpvbbbb |
1q15_A_177 | 1q15 | A | 177 | 187 | AQRLKPGAVHV | EEE--SSEEEE | bbxxpxvbbbb |
1qiu_A_333 | 1qiu | A | 335 | 344 | AINAGKGLEF. | EE---TTEEE. | bxxxbxvbbb. |
1qiu_A_357 | 1qiu | A | 358 | 367 | KTKIGSGIDY. | EE---TTEEE. | bxxbbpvbbb. |
1qiu_A_373 | 1qiu | A | 374 | 384 | ITKLGAGLSFD | EE---TTEEEE | bxxxbxvbbxx |
1six_A_49 | 1six | A | 50 | 60 | AVAVPFGMVGL | EEE--TTEEEE | bbbxxpvbbxb |
1sml_A_137 | 1sml | A | 137 | 146 | .RIVMDGEVIT | .EE--TT-EEE | .bxbbpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dx5_I_368 | 1dx5 | I | FMTFORMIC ACID | A - 373 |
1dx5_I_368 | 1dx5 | I | FMTFORMIC ACID | F - 376 |
1dx5_I_407 | 1dx5 | I | CACALCIUM ION | G - 412 |
1fjs_L_106 | 1fjs | L | GOLGLYCEROL | C - 111 |
1fjs_L_106 | 1fjs | L | GOLGLYCEROL | A - 112 |
1fjs_L_106 | 1fjs | L | GOLGLYCEROL | R - 113 |
1fjs_L_106 | 1fjs | L | GOLGLYCEROL | Y - 115 |
1nps_A_40 | 1nps | A | CACALCIUM ION | Y - 52 |
1nps_A_40 | 1nps | A | CACALCIUM ION | Q - 53 |
1nps_A_40 | 1nps | A | CACALCIUM ION | N - 54 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1lml_*_533 | 1lml | * | CA3CARBOHYDRATE BINDING SITE. | N - 534 |
Clusters included in this Subclass |
CLUSTER: AR.3.110 |
CLUSTER: AR.3.62 |
CLUSTER: AR.4.37 |
CLUSTER: AR.4.60 |
CLUSTER: AR.5.129 |
CLUSTER: AR.5.198 |
CLUSTER: AR.5.37 |