Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 3.6.3

Subclass Accession number: 1732 Subclass: 3.6.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 14 Average sequence ID (%) : 19.3 +/- 19.4 Average RMSD (Å) : 0.693 +/- 0.194 Consensus geometry d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bhe_*_57	1bhe	-	57	66	LSLPSGVSLL	EE--TT-EEE	bbxxxvbbbb
1e2w_A_70	1e2w	A	75	83	LILPEGFEL.	EE--TT-EE.	bbxxpgxbx.
1f42_A_273	1f42	A	276	285	VICRKNASIS	EE--TT-EEE	bbxbpvxbxb
1fye_A_186	1fye	A	188	197	IGLPEGNWIQ	EE--TT-EEE	bxxxpvbbbb
1g40_A_91	1g40	A	91	99	YSCNSGYHL.	EE--TT-EE.	xxbxpGpbx.
1gui_A_63	1gui	A	69	78	IGLYRGKTYT	EE--TT-EEE	bxbxpvbxbb
1ijq_A_673	1ijq	A	675	683	CACPDGMLL.	EE--TT-EE.	xbbppvbbx.
1kzq_A_29	1kzq	A	32	41	LKCPKTALTE	EE--TT-EEE	bbbxxvxbxb
1lml_*_533	1lml	-	533	542	TNCTPGLRVE	EE--TT-EEE	bpbxpgxbbx
1nzi_A_138	1nzi	A	141	149	CSCPPEYFL.	EE--TT-EE.	bbbxpvbbx.
1o59_A_135	1o59	A	141	150	FECGPSQRHL	EE--TT-EEE	bxbbxlbxbb
1uzp_A_1509	1uzp	A	1511	1519	CDCPPDFEL.	EE--TT-EE.	bxxxpvbbx.
1uzp_A_1628	1uzp	A	1631	1640	CRCPTGYYLN	EE--TT--EE	bbxxpvbbxx
2sak_*_38	2sak	-	47	55	FPIKPGTTL.	EE--TT-EE.	bxbbpgxxx.

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1e2w_A_70	1e2w	A	HECHEME C	N - 70
1e2w_A_70	1e2w	A	HECHEME C	V - 71
1e2w_A_70	1e2w	A	HECHEME C	G - 72
1e2w_A_70	1e2w	A	HECHEME C	M - 73
1e2w_A_70	1e2w	A	HECHEME C	V - 74
1f42_A_273	1f42	A	MNB5-MERCAPTO-2-NITRO-BENZOIC ACID	S - 285
1f42_A_273	1f42	A	MNB5-MERCAPTO-2-NITRO-BENZOIC ACID	R - 287
1gui_A_63	1gui	A	BGCBETA-D-GLUCOSE	Q - 64
1gui_A_63	1gui	A	BGCBETA-D-GLUCOSE	N - 66
1gui_A_63	1gui	A	GOLGLYCEROL	K - 82
1gui_A_63	1gui	A	GOLGLYCEROL	K - 84
1nzi_A_138	1nzi	A	CACALCIUM ION	G - 138
1nzi_A_138	1nzi	A	CACALCIUM ION	Y - 139
1o59_A_135	1o59	A	MSESELENOMETHIONINE	I - 137
1o59_A_135	1o59	A	MSESELENOMETHIONINE	V - 138
1o59_A_135	1o59	A	MSESELENOMETHIONINE	E - 139
1o59_A_135	1o59	A	MSESELENOMETHIONINE	F - 141
1o59_A_135	1o59	A	MSESELENOMETHIONINE	F - 151
1o59_A_135	1o59	A	MSESELENOMETHIONINE	V - 152
1uzp_A_1509	1uzp	A	SMSAMARIUM (III) ION	Y - 1509
1uzp_A_1628	1uzp	A	SMSAMARIUM (III) ION	S - 1628
1uzp_A_1628	1uzp	A	SMSAMARIUM (III) ION	F - 1629

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1e2w_A_70	1e2w	A	AC1HEC BINDING SITE FOR CHAIN A	N - 70
1e2w_A_70	1e2w	A	AC1HEC BINDING SITE FOR CHAIN A	G - 72
1gui_A_63	1gui	A	AC9BGC BINDING SITE FOR CHAIN A	Q - 64
1gui_A_63	1gui	A	AC9BGC BINDING SITE FOR CHAIN A	N - 66
1gui_A_63	1gui	A	AC4GOL BINDING SITE FOR CHAIN A	K - 82
1gui_A_63	1gui	A	AC3GOL BINDING SITE FOR CHAIN A	K - 84
1lml_*_533	1lml	*	CA3CARBOHYDRATE BINDING SITE.	N - 534
1uzp_A_1628	1uzp	A	AC2SM BINDING SITE FOR CHAIN A	S - 1628

Clusters included in this Subclass

CLUSTER: AR.4.44

CLUSTER: AR.5.27

CLUSTER: AR.6.7

For any comment or web-related incidence, send an email to the webmaster.