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Information on SUBCLASS 3.7.1
Subclass Accession number: 1733
Subclass: 3.7.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.8 (>50 %)  1.8.1 (>50 %)  
GO : GO:0005489 (>75 %)  GO:0015036 (>75 %)  GO:0016667 (>50 %)  GO:0016668 (>50 %)  
SCOP : 51904 (>75 %)  51905 (>75 %)  51943 (>75 %)  
 Number of loops: 44

Average sequence ID (%) : 8.3 +/- 12.5
Average RMSD (Å) : 0.564 +/- 0.201

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: hpXpXph
(φψ)-conformation: bbaapbb
Pattern: xx[acfgiklmv][adegknrst]x[adegknrst][adegknqrst]x[afgilmvwy]x
Conservation:-1.000-0.9850.3751.534-1.164-0.0770.074-0.1761.445-1.026
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1acc_*_5881acc   -590598LIRDKRFHY.EEEETTSEE.bbbxaabxb.
1am2_*_21am2   -29..ITGDALVA..EETT-EEE..bxaapxxx
1byf_A_1051byf   A107116DDVGCGGARREEE-S-S-EEbxbxaaxxbx
1dci_A_1831dci   A184193RYCTQDAFFQEEEETT-EEEbbbxaaxbbb
1dq3_A_21dq3   A29..IDGKAKII..EETT-EEE..bpaaxxbb
1ef8_A_1201ef8   A121130IIAASTSTFSEEEETT-EEEbbbxaaxbbb
1ey3_A_1511ey3   A152161IYAGEKAQFGEEEETT-EEEbbbxaaxbbb
1g5a_A_6081g5a   A608616.TVSLNQDLT.EEE-SS-EE.xbxaabpbb
1g97_A_2611g97   A261268.YIDIDVEI..EE-TT-EE..bbxaaxbb.
1gpp_A_721gpp   A7382FTCNATHELVEEEETT-EEEbbbxaaxxxx
1gxy_A_1661gxy   A169177IIKTCLGVY.EEEESS-EE.bbbbaaxbx.
1h3f_A_4091h3f   A409417.QVDLSRPRI.EEE-SS-EE.bbbaabpbb
1hzd_A_1961hzd   A197206RVAASSAKMGEEEETT-EEEbbbxaaxbbe
1j2z_A_271j2z   A2734.VIGDGVKL..EE-TT-EE..bbxaaxbb.
1jk3_A_1951jk3   A195204AHFDEDEFWTEEEETTS-EEbbbxaaxbxb
1jva_A_3551jva   A356365FTCNATNELVEEEETT-EEEbbbxaaxxxx
1jwi_B_1081jwi   B109118IQWTCNRKKSEEEETTS-EEbxbxaaxbbx
1ktb_A_3601ktb   A362371SGLKTGDNFTEEEETTSEEEabxxaaxxbb
1l6j_A_2021l6j   A202211AHFDDDELWSEEEETTS-EEbbbxaaxxxb
1lns_A_7141lns   A716725YHLEKADKLREEE-TT-EEEbbbxaaxbbx
1m2o_A_4441m2o   A448457ASLSPYHSYAEEE-TT--EEabbbaabbbb
1mdb_A_3551mdb   A355364KPMSPYDESREESSTT-EEEbpabaaxbbb
1mi8_A_21mi8   A29..ISGDSLIS..EETT-EEE..bxaapxxx
1mi8_A_661mi8   A6776IKATANHRFLEEE-TT-EEEbbbxaaxxbx
1mnn_A_1051mnn   A106115WVGYKRNYFTEEEETTS-EEbbbbaabxbb
1nzy_A_1241nzy   A125134AICADSAKFVEEEETT-EEEbbbxaaxbbb
1o65_A_1621o65   A162171GKVSADAPLEEEEETTS-EEexbbaaxxxb
1o8u_A_1311o8u   A132140VLAAESATF.EEEETT-EE.bbbxaaxbb.
1od3_A_231od3   A2330..RSAFSNIQ..EETTS-EE..xxaabpbx
1ojj_A_2601ojj   A260267..VNTLKPFT..EETTS-EE..bxaabwbb
1on3_A_1921on3   A193202IIMTKKAHMFEEEETT-EEEbbbxaaxbbb
1on3_A_4281on3   A429438VYAWPSAEIAEEE-TT-EEEbbbxaaxbxb
1osy_A_851osy   A8592..VADTKTIQ..EETTS-EE..bpaabxbb
1pg6_A_1761pg6   A177186VAWSRELDYDEEEETTSEEEabbpaaxxbb
1pwb_A_3401pwb   A341350NDRACGEKRLEEE-TTSEEEbxbxaaxbbp
1q2b_A_2821q2b   A282289..LDTTKKLT..EETTS-EE..bxaabxbb
1q7z_A_3091q7z   A309317.LVTFDHFVV.EEESSS-EE.bbxaabxbx
1qre_A_271qre   A2734.VIDPTAYI..EE-TT-EE..bbxaaxbb.
1slm_*_1781slm   -178187AHFDDDEQWTEEEETTS-EEbbbxaaxxxb
1tdt_A_2071tdt   A207215.YLGQSTRIY.EE-TT--EE.bbbaaxxbx
1tn3_*_1621tn3   -164173FDKRCRDQLPEEE-TTS-EEbxbxaaxbbw
1uyr_A_20121uyr   A20142023MYADVNARAGEEEETT-EEEbbbxaabbbe
1vio_A_401vio   A4048.QISQEDEIY.EE-TTS-EE.xbbaaxbbb
1vk6_A_31vk6   A312RIIEKLDHGWEE--TT-EEEbxxbaapbeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1byf_A_1051byf   A     OC6CALCIUM ION, 6 WATERS COORDINATED L - 105
1byf_A_1051byf   A     CACALCIUM ION D - 107
1byf_A_1051byf   A     ACTACETATE ION D - 107
1byf_A_1051byf   A     GOLGLYCEROL D - 107
1byf_A_1051byf   A     CACALCIUM ION D - 108
1byf_A_1051byf   A     GOLGLYCEROL D - 108
1byf_A_1051byf   A     CACALCIUM ION V - 109
1byf_A_1051byf   A     ACTACETATE ION V - 109
1byf_A_1051byf   A     GOLGLYCEROL V - 109
1byf_A_1051byf   A     ACTACETATE ION A - 114
1byf_A_1051byf   A     ZNZINC ION R - 115
1byf_A_1051byf   A     ACTACETATE ION R - 115
1dci_A_1831dci   A     EDO1,2-ETHANEDIOL I - 183
1dci_A_1831dci   A     EDO1,2-ETHANEDIOL R - 184
1j2z_A_271j2z   A     TARD(-)-TARTARIC ACID I - 28
1j2z_A_271j2z   A     TARD(-)-TARTARIC ACID G - 29
1j2z_A_271j2z   A     TARD(-)-TARTARIC ACID D - 30
1j2z_A_271j2z   A     TARD(-)-TARTARIC ACID G - 31
1jk3_A_1951jk3   A     ZNZINC ION H - 196
1jk3_A_1951jk3   A     CACALCIUM ION D - 198
1jk3_A_1951jk3   A     CACALCIUM ION E - 199
1jk3_A_1951jk3   A     CACALCIUM ION D - 200
1jk3_A_1951jk3   A     CACALCIUM ION E - 201
1jk3_A_1951jk3   A     CACALCIUM ION F - 202
1jk3_A_1951jk3   A     CACALCIUM ION W - 203
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL I - 361
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL L - 364
1ktb_A_3601ktb   A     NAGN-ACETYL-D-GLUCOSAMINE N - 369
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL N - 369
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL F - 370
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL T - 371
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL V - 372
1ktb_A_3601ktb   A     CRYPROPANE-1,2,3-TRIOL I - 373
1l6j_A_2021l6j   A     ZNZINC ION H - 203
1l6j_A_2021l6j   A     CACALCIUM ION D - 205
1l6j_A_2021l6j   A     CACALCIUM ION D - 206
1l6j_A_2021l6j   A     CACALCIUM ION D - 207
1l6j_A_2021l6j   A     CACALCIUM ION E - 208
1l6j_A_2021l6j   A     CACALCIUM ION L - 209
1l6j_A_2021l6j   A     CACALCIUM ION W - 210
1nzy_A_1241nzy   A     CACALCIUM ION V - 134
1nzy_A_1241nzy   A     BCA4-HYDROXYBENZOYL COENZYME A V - 134
1od3_A_231od3   A     BGCBETA-D-GLUCOSE R - 23
1od3_A_231od3   A     CACALCIUM ION Q - 30
1on3_A_1921on3   A     MCAMETHYLMALONYL-COENZYME A F - 202
1on3_A_1921on3   A     DXXMETHYLMALONIC ACID F - 202
1on3_A_4281on3   A     MCAMETHYLMALONYL-COENZYME A A - 438
1pwb_A_3401pwb   A     GLCGLUCOSE N - 341
1pwb_A_3401pwb   A     CACALCIUM ION N - 341
1pwb_A_3401pwb   A     GLCGLUCOSE D - 342
1pwb_A_3401pwb   A     CACALCIUM ION D - 342
1pwb_A_3401pwb   A     GLCGLUCOSE R - 343
1pwb_A_3401pwb   A     CACALCIUM ION R - 343
1q2b_A_2821q2b   A     COCOBALT (II) ION T - 292
1q2b_A_2821q2b   A     COCOBALT (II) ION Q - 293
1slm_*_1781slm   *     ZNZINC ION H - 179
1slm_*_1781slm   *     CACALCIUM ION D - 181
1slm_*_1781slm   *     CACALCIUM ION D - 183
1slm_*_1781slm   *     CACALCIUM ION E - 184
1tn3_*_1621tn3   *     CACALCIUM ION F - 164
1tn3_*_1621tn3   *     CACALCIUM ION D - 165
1tn3_*_1621tn3   *     CACALCIUM ION K - 166
1vk6_A_31vk6   A     MSESELENOMETHIONINE R - 3
1vk6_A_31vk6   A     MPD2-METHYL-2,4-PENTANEDIOL R - 3
1vk6_A_31vk6   A     MSESELENOMETHIONINE V - 15
1vk6_A_31vk6   A     MSESELENOMETHIONINE S - 16
1vk6_A_31vk6   A     MSESELENOMETHIONINE H - 17
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1byf_A_1051byf   A CAACARBOHYDRATE BINDING CALCIUM SITED - 107
1byf_A_1051byf   A CAACARBOHYDRATE BINDING CALCIUM SITED - 108
1od3_A_231od3   A AC4CA BINDING SITE FOR CHAIN AQ - 30
1slm_*_1781slm   * ZN2ZN2 ARE THE LIGANDS OF THE STRUCTURAL (ZN 258) ZINC ION.H - 179
1slm_*_1781slm   * CA1CA1 ARE THE LIGANDS OF THE CALCIUM ION CA 259D - 181
1slm_*_1781slm   * CA1CA1 ARE THE LIGANDS OF THE CALCIUM ION CA 259E - 184
1tn3_*_1621tn3   * CA2CALCIUM BINDING SITE 2.D - 165

Clusters included in this Subclass
CLUSTER: AR.2.29
CLUSTER: AR.3.17
CLUSTER: AR.4.6
CLUSTER: AR.5.24
CLUSTER: AR.5.34