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Information on SUBCLASS 2.9.2
Subclass Accession number: 179
Subclass: 2.9.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.8 (>75 %)  3.4 (>75 %)  3.4.22 (>75 %)  
GO : GO:0003723 (>75 %)  GO:0004175 (>50 %)  GO:0004197 (>50 %)  GO:0008233 (>50 %)  GO:0008234 (>50 %)  GO:0016782 (>75 %)  
SCOP : 54000 (>75 %)  54001 (>75 %)  54002 (>75 %)  54861 (>75 %)  54928 (>75 %)  54929 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 31.5 +/- 18.0
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pXGpIX
(φψ)-conformation: aaeppa
Pattern: [EK][DEK][EQS][IL][HQY][AE][IKL][F][CS][DKR]x[G][DEQ][I][KL][DKN][I][HIL]
Conservation:0.284-0.301-0.4500.251-0.153-0.449-1.2652.218-0.219-0.746-0.6722.218-0.0050.884-0.766-0.5240.884-1.191
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h6k_X_531h6k   X5370EEQIYELFSKSGDIKKIIHHHHHHHHGGGS-EEEEEaaaaaaaaaaaexxabbb
1nu4_A_231nu4   A2744KKSLHAIFSRFGQILDILHHHHHHHHGGGS-EEEEEaaaaaaaaaaaexxabbb
1oo0_B_861oo0   B86103EDEIQEKFCDYGEIKNIHHHHHHHHHGGGS-EEEEEaaaaaaaaaaaexxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nu4_A_231nu4   A     MLAMALONIC ACID K - 23
1nu4_A_231nu4   A     MGMAGNESIUM ION K - 27
1nu4_A_231nu4   A     MLAMALONIC ACID K - 27
1nu4_A_231nu4   A     MLAMALONIC ACID H - 31
1nu4_A_231nu4   A     MLAMALONIC ACID Q - 39
1nu4_A_231nu4   A     MLAMALONIC ACID I - 40
1nu4_A_231nu4   A     MGMAGNESIUM ION L - 41
1nu4_A_231nu4   A     MLAMALONIC ACID L - 41
1nu4_A_231nu4   A     MGMAGNESIUM ION D - 42
1nu4_A_231nu4   A     MLAMALONIC ACID D - 42
1nu4_A_231nu4   A     MGMAGNESIUM ION I - 43
1nu4_A_231nu4   A     MLAMALONIC ACID I - 43
1nu4_A_231nu4   A     MGMAGNESIUM ION L - 44

Clusters included in this Subclass
CLUSTER: HE.4.201