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Information on SUBCLASS 4.4.2
Subclass Accession number: 1798
Subclass: 4.4.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.1
GO : GO:0004553 (>75 %)  GO:0016160 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51010 (>75 %)  51011 (>75 %)  51012 (>75 %)  51268 (>75 %)  
Number of loops: 12

Average sequence ID (%) : 20.0 +/- 19.9
Average RMSD (Å) : 0.425 +/- 0.245

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: phpXcpXh
(φψ)-conformation: bbppgppa
Pattern: x[ekrst][AILV][ehknqrty][dekpr][gnr][ADEKQT]x[FILVW]
Conservation:-1.000-0.8821.345-0.703-0.3621.230-0.163-1.2670.802
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bdo_*_1081bdo   -108115.KVNVGDTL.EE-TT-EE.xbbpvxxa
1brw_A_3871brw   A387394.RVQKGEAL.EE-TT-EE.xbbpvxxa
1euw_A_1091euw   A109117FTIQPGERIEEE-TT-EEbbxxpvxxa
1f7d_A_901f7d   A9098ITLMERQKIEEE-TT-EEbbxxpvxxa
1htp_*_491htp   -4956.SVTKGKGF.EE-BTSEE.xbbpvbxa
1je5_A_111je5   A1119GTAEPYAYIEEE-SS-EEbbxxxvxba
1pkh_A_1531pkh   A153161VILYKNQRIEEEETT-EEbxbbpvxxa
1q5h_A_981q5h   A98106FEVKKGDRIEEE-TT-EEbbbbpvxxa
1qpo_A_721qpo   A7684DRVEDGARVEE--TT-EEbbbxpgxxb
1six_A_1031six   A103111IVVHRGDRIEEE-TT-EEbbbbpvxxa
1tul_*_931tul   -93101IKLNKGQMLEEE-TT-EExbbxpvxxa
1uou_A_4301uou   A430437.RLRRGTPW.EE-TT-EE.xbxxvxwa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bdo_*_1081bdo   *     BTNBIOTIN I - 117
1bdo_*_1081bdo   *     BTNBIOTIN E - 119
1htp_*_491htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID V - 59
1htp_*_491htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID S - 61
1pkh_A_1531pkh   A     EGLETHYLENE GLYCOL N - 158
1pkh_A_1531pkh   A     EGLETHYLENE GLYCOL Q - 159
1pkh_A_1531pkh   A     EGLETHYLENE GLYCOL R - 160
1q5h_A_981q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE R - 105
1q5h_A_981q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE Q - 108
1q5h_A_981q5h   A     MGMAGNESIUM ION E - 112
1q5h_A_981q5h   A     MGMAGNESIUM ION R - 113
1six_A_1031six   A     MGMAGNESIUM ION R - 110
1six_A_1031six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE R - 110
1six_A_1031six   A     MGMAGNESIUM ION Q - 113
1six_A_1031six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE Q - 113

Clusters included in this Subclass
CLUSTER: AR.3.52
CLUSTER: AR.4.47
CLUSTER: AR.5.63