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Information on SUBCLASS 4.5.2
Subclass Accession number: 1806
Subclass: 4.5.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005507 (>75 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>50 %)  49503 (>50 %)  
 Number of loops: 18

Average sequence ID (%) : 23.3 +/- 21.2
Average RMSD (Å) : 0.667 +/- 0.270

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: hXhXpXGX
(φψ)-conformation: bbpabpeb
Pattern: x[acflvwy][akltv][afgiptv][adegknrst][aeknqrst][aepst][G]x[fivwy][afikltv]
Conservation:-0.389-0.006-0.157-0.477-0.538-0.1360.1002.923-0.608-0.121-0.591
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_4891aoz   A494504RFVADNPGVWAEEE--S-EEEEbbxxabpebbx
1aoz_A_881aoz   A92102NFTVDNPGTFFEEE--S-EEEEbbbbabxexbb
1cwv_A_7601cwv   A763773TVVGNSVGDVTEEE-SS-EEEEbbbbabxebbb
1ex0_A_6881ex0   A694704VCRPWVSGHRKEE--SS-EEEExbbxabxexbb
1f00_I_7171f00   I721730TLTSTTPGKS.EEE-SS-EEE.bbbbabxexb.
1fwx_A_5441fwx   A548558TFVAANPGVYWEEE--S-EEEEbbbxabxexbb
1gw0_A_1211gw0   A126136RWRARQYGTSWEEE--S-EEEEbbxxabbebbb
1gw0_A_4861gw0   A490500AFRTDNPGAWLEEE--S-EEEEbbxxabpebbx
1hfu_A_4351hfu   A439449RFVTDNPGPWFEEE--S-EEEEbbbxabpewbx
1iby_A_781iby   A8292SFTADKAGAFTEEE--S-EEEEbbbxabxebbx
1itw_A_1861itw   A187197AALIGAPGSVKEEE--SSEEEEbbbxabpebbb
1kbv_A_1171kbv   A122132SFKALQPGLYIEEE--S-EEEEbbxxabxebbx
1l0q_A_3521l0q   A352362THTYSETGIYTEE--SS-EEEEbbbxabxebbb
1m56_B_2361m56   B239249WFRAEREGIFFEEE-SS-EEEEbbbxabxebbb
1oe1_A_1121oe1   A117127RFKADRSGTFVEEE--S-EEEEbbxxabxexbx
1oe1_A_2811oe1   A286296LYTFKQPGVYAEEE--S-EEEEbbbxabxebxb
1pg6_A_841pg6   A8797ALAPNTPGQIVEE--SSSB-EEbbbxabxebbb
2cua_A_1332cua   A136146RYTFKRPGEYREEE--S-EEEEbbbxabwebbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoz_A_881aoz   A     NAGN-ACETYL-D-GLUCOSAMINE F - 90
1aoz_A_881aoz   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 91
1aoz_A_881aoz   A     NAGN-ACETYL-D-GLUCOSAMINE N - 92
1aoz_A_881aoz   A     CUCOPPER (II) ION F - 102
1aoz_A_881aoz   A     C2OCU-O-CU LINKAGE F - 102
1aoz_A_881aoz   A     CUCOPPER (II) ION H - 104
1aoz_A_881aoz   A     C2OCU-O-CU LINKAGE H - 104
1aoz_A_881aoz   A     C1OCU-O LINKAGE H - 104
1aoz_A_4891aoz   A     CUCOPPER (II) ION A - 504
1aoz_A_4891aoz   A     C2OCU-O-CU LINKAGE A - 504
1aoz_A_4891aoz   A     CUCOPPER (II) ION H - 506
1aoz_A_4891aoz   A     C2OCU-O-CU LINKAGE H - 506
1aoz_A_4891aoz   A     C1OCU-O LINKAGE H - 506
1aoz_A_4891aoz   A     CUCOPPER (II) ION C - 507
1gw0_A_1211gw0   A     O2OXYGEN MOLECULE W - 136
1gw0_A_1211gw0   A     CUCOPPER (II) ION W - 136
1gw0_A_1211gw0   A     O2OXYGEN MOLECULE H - 138
1gw0_A_1211gw0   A     CUCOPPER (II) ION H - 138
1gw0_A_1211gw0   A     O2OXYGEN MOLECULE S - 139
1gw0_A_4861gw0   A     CUCOPPER (II) ION L - 500
1gw0_A_4861gw0   A     O2OXYGEN MOLECULE H - 502
1gw0_A_4861gw0   A     CUCOPPER (II) ION H - 502
1gw0_A_4861gw0   A     CUCOPPER (II) ION C - 503
1hfu_A_4351hfu   A     CUCOPPER (II) ION F - 449
1hfu_A_4351hfu   A     CUCOPPER (II) ION H - 451
1hfu_A_4351hfu   A     CUCOPPER (II) ION C - 452
1kbv_A_1171kbv   A     CUCOPPER (II) ION I - 132
1kbv_A_1171kbv   A     CUCOPPER (II) ION H - 134
1kbv_A_1171kbv   A     NO2NITRITE ION H - 134
1oe1_A_1121oe1   A     PCAPYROGLUTAMIC ACID K - 119
1oe1_A_1121oe1   A     CUCOPPER (II) ION V - 127
1oe1_A_1121oe1   A     CUCOPPER (II) ION H - 129
1oe1_A_2811oe1   A     PG4TETRAETHYLENE GLYCOL V - 294
1oe1_A_2811oe1   A     PG4TETRAETHYLENE GLYCOL Y - 295
1oe1_A_2811oe1   A     PG4TETRAETHYLENE GLYCOL A - 296
1oe1_A_2811oe1   A     PG4TETRAETHYLENE GLYCOL L - 298
1pg6_A_841pg6   A     MSESELENOMETHIONINE L - 86
1pg6_A_841pg6   A     MSESELENOMETHIONINE A - 87
1pg6_A_841pg6   A     CACALCIUM ION A - 87
1pg6_A_841pg6   A     MSESELENOMETHIONINE L - 88
1pg6_A_841pg6   A     CACALCIUM ION L - 88
1pg6_A_841pg6   A     MSESELENOMETHIONINE A - 89
1pg6_A_841pg6   A     CACALCIUM ION A - 89
1pg6_A_841pg6   A     CACALCIUM ION P - 90
1pg6_A_841pg6   A     CACALCIUM ION N - 91
1pg6_A_841pg6   A     CACALCIUM ION T - 92
1pg6_A_841pg6   A     CACALCIUM ION P - 93
1pg6_A_841pg6   A     CACALCIUM ION G - 94
1pg6_A_841pg6   A     CACALCIUM ION Q - 95
2cua_A_1332cua   A     ZNZINC ION I - 148
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_1211gw0   A DC9NAG BINDING SITE FOR CHAIN BR - 126
1gw0_A_1211gw0   A DC1SO4 BINDING SITE FOR CHAIN AR - 128
1gw0_A_1211gw0   A DC1SO4 BINDING SITE FOR CHAIN AR - 130
1gw0_A_1211gw0   A AC4CU BINDING SITE FOR CHAIN AW - 136
1gw0_A_1211gw0   A AC1O2 BINDING SITE FOR CHAIN AH - 138
1gw0_A_4861gw0   A GC9SO4 BINDING SITE FOR CHAIN BR - 492
1gw0_A_4861gw0   A AC1O2 BINDING SITE FOR CHAIN AH - 502
1gw0_A_4861gw0   A AC2CU BINDING SITE FOR CHAIN AC - 503
1hfu_A_4351hfu   A T1TYPE 1 CU BINDING SITE.C - 452
1oe1_A_1121oe1   A AC2CU BINDING SITE FOR CHAIN AH - 129
1oe1_A_2811oe1   A AC3PG4 BINDING SITE FOR CHAIN AA - 296

Clusters included in this Subclass
CLUSTER: AR.5.8
CLUSTER: AR.6.130