ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.1.1

Subclass Accession number: 182
Subclass: 6.1.1
Type: HH alpha-alpha
DB: ArchDB-KI

Number of loops: 6

Average sequence ID (%) : 82.1 +/- 6.4
Average RMSD (Å) : 0.43 +/- 0.21

Consensus geometry

d (Å): 13

delta (°): 135-180

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	LLGCKYYSTA
(φψ)-conformation:	aalpaapbaa

Pattern:	[P]	[E]	[IL]	[L]	[LV]	[DG]	[CL]	[KQ]	[DY]	[Y]	[DS]	[TY]	x	[LV]	[D]	[IM]	[W]	[S]	[L]	[G]	[C]	[IM]	[F]	[A]	x	[M]	[IV]	[FT]
Conservation:	1.250	0.380	-0.489	-0.054	-0.706	-0.706	-0.598	-0.489	-1.032	1.250	-0.706	-0.924	-0.706	-0.706	0.815	-0.598	2.988	-0.054	-0.054	0.815	2.119	-0.598	0.815	-0.054	-1.032	0.380	-0.272	-1.032

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a6o_*_200	1a6o	-	200	227	PELLVDLQDYDYSLDMWSLGCMFAGMIF	HHHHTT--S--TTHHHHHHHHHHHHHHH	aaaaavxaxxbaaaaaaaaaaaaaaaaa
1aq1_*_171	1aq1	-	171	198	PEILLGCKYYSTAVDIWSLGCIFAEMVT	HHHHTT-SS--THHHHHHHHHHHHHHHH	aaaaavxaaxbaaaaaaaaaaaaaaaaa
1b38_A_171	1b38	A	171	198	PEILLGCKYYSTAVDIWSLGCIFAEMVT	HHHHTT-SS--THHHHHHHHHHHHHHHH	aaaaavxaaxbaaaaaaaaaaaaaaaaa
1ckp_*_171	1ckp	-	171	198	PEILLGCKYYSTAVDIWSLGCIFAEMVT	HHHHTT-SS--THHHHHHHHHHHHHHHH	aaaaavpaaxbaaaaaaaaaaaaaaaaa
1hcl_*_171	1hcl	-	171	198	PEILLGCKYYSTAVDIWSLGCIFAEMVT	HHHHTT-SS--THHHHHHHHHHHHHHHH	aaaaavxabxbaaaaaaaaaaaaaaaaa
1jsu_A_171	1jsu	A	171	198	PEILLGCKYYSTAVDIWSLGCIFAEMVT	HHHHTT-SS--THHHHHHHHHHHHHHHH	aaaaavpabbbaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass