ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.25.1

Subclass Accession number: 1842
Subclass: 4.25.1

Type: AR beta-beta link
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.14 (>75 %)  3.2 (>50 %)  3.2.1 (>50 %)
GO : GO:0016798 (>50 %)
SCOP : 51125 (>75 %)  51126 (>75 %)  56511 (>75 %)  56512 (>75 %)  56513 (>75 %)

Number of loops: 3

Average sequence ID (%) : 17.8 +/- 15.0
Average RMSD (Å) : 0.600 +/- 0.173

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 45-90

rho (°): 45-90

Consensus Sequence:	XXpDchhX
(φψ)-conformation:	bbabpabb

Pattern:	[TV]	x	x	[DN]	[NV]	x	x	x	[GNV]	[KNQ]	[D]	[DG]	[ACI]	[IV]	[AKT]
Conservation:	0.235	-1.088	-0.663	1.140	-0.181	-0.734	-1.017	-0.167	-0.946	0.045	2.594	0.582	-0.309	1.029	-0.521

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1hg8_A_199	1hg8	A	202	216	TLDNNHVYNQDDCVA	EEEEEEEE-SS-SEE	bbblbbbbbabpabb
1ogm_X_385	1ogm	X	385	399	VVHDVFWHVNDDAIK	EEEEEEEEESS-SEE	bbbvbbbxbabpabx
1tyv_*_291	1tyv	-	293	307	VDANNPSGGKDGIIT	EEEEEEEE-SS-SEE	blpxlxxxbaxpabb

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1ogm_X_385	1ogm	X	CATCATALYTIC RESIDUES	D - 395
1ogm_X_385	1ogm	X	CATCATALYTIC RESIDUES	D - 396

Clusters included in this Subclass

CLUSTER: AR.4.185