Logo
Information on SUBCLASS 3.1.5
Subclass Accession number: 187
Subclass: 3.1.5 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 13.2 +/- 15.1
Average RMSD (Å) : 0.780 +/- 0.185

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXchpXh
(φψ)-conformation: aalpabb
Pattern: x[adegnqt]x[acfiklm]xxx[EGKNS][ACFGMPVY][adekrst]x[afgilmtv]
Conservation:-1.191-0.342-0.9720.0520.040-0.498-0.8082.2570.0961.280-0.6180.703
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fsg_A_1531fsg   A159170GERLKAVGPKSMHHHHHTT--SEEaaaaaaavxabb
1g61_A_21691g61   A21732184EFLKSLFKVEYIHHHHHHHT-SEEaaaaaaalbabb
1g6h_A_1561g6h   A164175IGRALMTNPKMIHHHHHHT--SEEaaaaaaalxabb
1h7w_A_3421h7w   A348359ATSALRCGARRVHHHHHHTT-SEEaaaaaaagpabb
1hgx_A_1091hgx   A115126LNNLQMRKPASLHHHHHTT--SEEaaaaaaavxabb
1hp1_A_1921hp1   A201212QELQQTEKPDIIHHHHHHT--SEEaaaaaaalxabb
1i39_A_781i39   A8798AEIILRLKPEIAHHHHHHH--SEEaaaaaaalxabb
1im8_A_2101im8   A214225KVRLKNVGFSQVHHHHHHHT-SEEaaaaaaagpabb
1j3w_A_111j3w   A2132EETLRETGARYAHHHHHHH--SEEaaaaaaavxabb
1j7j_A_1061j7j   A112123REILGLREPKSLHHHHHTT-BSEEaaaaaaalxabb
1j8m_F_1651j8m   F173184VEKFLSEKMEIIHHHHHHTT-SEEaaaaaaavpabb
1k75_A_1461k75   A146157ATPASIAGCKKVHHHHHHHT-SEEaaaaaaavxabb
1khd_A_2121khd   A216227AQALKVLGYKNAHHHHHHTT-SEEaaaaaaavxabb
1m3k_A_3531m3k   A362373LFEMKRRGARKGHHHHHHHT-SEEaaaaaaavxabb
1meo_A_1201meo   A121132HEQALETGVTVTHHHHHHHT-SEEaaaaaaavxabb
1mu5_A_3191mu5   A324335LGLKKIFNPDFAHHHHHHH--SEEaaaaaaalxabb
1nmo_A_1791nmo   A179190IDSAARFGVDAFHHHHHHH--SEEaaaaaaaSbabb
1ono_A_391ono   A4354VEQCLEFSPRYAHHHHHHH--SEEaaaaaaalxabb
1qme_A_2671qme   A278289DAFQEKVKGKYMHHHHHHH--SEEaaaaaaalxabb
1v39_*_1501v39   -161172NVMISILNPVASHHHHHHH--SEEaaaaaaalxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fsg_A_1531fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID F - 153
1fsg_A_1531fsg   A     MO2MAGNESIUM ION, 2 WATERS COORDINATED T - 154
1fsg_A_1531fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID T - 154
1fsg_A_1531fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID L - 155
1fsg_A_1531fsg   A     9DG9-DEAZAGUANINE K - 178
1g6h_A_1561g6h   A     MGMAGNESIUM ION D - 178
1g6h_A_1561g6h   A     ADPADENOSINE-5'-DIPHOSPHATE D - 178
1h7w_A_3421h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 342
1h7w_A_3421h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 343
1h7w_A_3421h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 344
1h7w_A_3421h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 346
1hgx_A_1091hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE L - 109
1hgx_A_1091hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE T - 110
1hgx_A_1091hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE M - 111
1hgx_A_1091hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE K - 134
1hp1_A_1921hp1   A     ZNZINC ION H - 217
1hp1_A_1921hp1   A     CO3CARBONATE ION H - 217
1im8_A_2101im8   A     MSESELENOMETHIONINE I - 210
1im8_A_2101im8   A     MSESELENOMETHIONINE H - 213
1im8_A_2101im8   A     MSESELENOMETHIONINE K - 214
1im8_A_2101im8   A     MSESELENOMETHIONINE L - 217
1im8_A_2101im8   A     MSESELENOMETHIONINE V - 225
1k75_A_1461k75   A     MSESELENOMETHIONINE A - 146
1k75_A_1461k75   A     MSESELENOMETHIONINE T - 147
1k75_A_1461k75   A     MSESELENOMETHIONINE P - 148
1nmo_A_1791nmo   A     MSESELENOMETHIONINE D - 180
1v39_*_1501v39   *     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 156
1v39_*_1501v39   *     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 159
1v39_*_1501v39   *     SAHS-ADENOSYL-L-HOMOCYSTEINE K - 175

Clusters included in this Subclass
CLUSTER: HE.3.24
CLUSTER: HE.4.22