Information on SUBCLASS 5.4.2 |
Subclass Accession number: 1875
Subclass: 5.4.2 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004872 (>50 %) GO:0004872 (>75 %) GO:0005529 (>75 %) GO:0005529 (>75 %) GO:0005537 (>75 %) GO:0030246 (>75 %) GO:0030246 (>75 %) GO:0048029 (>75 %) SCOP : 56435 (>75 %) 56435 (>75 %) 56436 (>75 %) 56436 (>75 %) 56437 (>75 %) 56437 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 33.8 +/- 22.7 Average RMSD (Å) : 0.280 +/- 0.084 Consensus geometry
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Consensus Sequence: | DXpCppXpp |
(φψ)-conformation: | bbpaappbp |
Pattern: | [VW] | [NS] | [DS] | x | x | [C] | [DEQS] | [hkr] | x | x | [nry] | [AW] | [ILV] | [C] | [EKNQY] | [IKT] |
Conservation: | 0.784 | 0.395 | 0.267 | -0.880 | -0.772 | 2.075 | -0.259 | -0.647 | -0.959 | -0.831 | -0.790 | 0.784 | 0.054 | 2.075 | -0.615 | -0.681 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dv8_A_263 | 1dv8 | A | 263 | 278 | WNDDVCQRPYRWVCET | EEEE-TTS-BEEEEEE | xbxbxaaxxbxbbbbb |
1e87_A_180 | 1e87 | A | 181 | 196 | VSSMECEKNLYWICNK | EEEE-TTS-BEEEEEE | bbbbpaaxxbxbbbbb |
1egi_A_746 | 1egi | A | 746 | 761 | WNDINCEHLNNWICQI | EEEEETTS-BEEEEEE | bbxbpaaxxbxbbbbb |
1g1t_A_104 | 1g1t | A | 104 | 119 | WNDERCSKKKLALCYT | EEEE-TTS-BEEEEEE | bbxbxaaxbbxxbbbb |
1k9j_A_375 | 1k9j | A | 376 | 391 | WNDNRCDVDNYWICKK | EEEE-TTS-BEEEEEE | bbxbxaaxxbxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: AR.6.27 |