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Information on SUBCLASS 3.1.6
Subclass Accession number: 188
Subclass: 3.1.6 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>50 %)  1.2 (>75 %)  1.2.1 (>50 %)  1.2.1 (>75 %)  1.2.1.121.2.1.12
GO : GO:0004553 (>75 %)  GO:0008943 (>50 %)  GO:0008943 (>75 %)  GO:0016620 (>50 %)  GO:0016620 (>75 %)  GO:0016798 (>75 %)  GO:0016903 (>50 %)  GO:0016903 (>75 %)  
SCOP : 51350 (>75 %)  51445 (>75 %)  51534 (>75 %)  51734 (>50 %)  51734 (>75 %)  51735 (>50 %)  51735 (>75 %)  51800 (>50 %)  51800 (>75 %)  
 Number of loops: 13

Average sequence ID (%) : 20.0 +/- 18.7
Average RMSD (Å) : 0.569 +/- 0.160

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXchcGh
(φψ)-conformation: aalpaeb
Pattern: [AFILTV]x[ADKNQST][aikv][agiltv][adekrs][afily][AILMVW]x[adekqst]x[GKNQS][AFILM][dgk][G][AFGILVW]x[ailvw]
Conservation:-0.041-0.984-0.047-0.151-0.363-0.476-0.0780.198-0.235-0.226-0.7030.8460.0430.0523.640-0.622-0.798-0.056
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2k_A_1441d2k   A151168ADTSLKLMKDLGFDGIDIHHHHHHHHHHHT-SEEEEaaaaaaaaaaavxaebbb
1d2k_A_3571d2k   A360377AGKKAEYITKNGMGGGMWHHHHHHHHHHTT--EEEEaaaaaaaaaaalxaebbb
1edq_A_5181edq   A521538VQAKGKYVLDKQLGGLFSHHHHHHHHHHHT--EEEEaaaaaaaaaaavxaebbb
1h7w_A_7171h7w   A717734IVSIARAAKEGGADGVTAHHHHHHHHHHHT-SEEEEaaaaaaaaaaagxaebbb
1hkk_A_1131hkk   A120137VNSAIRFLRKYSFDGLDLHHHHHHHHHHHT--EEEEaaaaaaaaaaavxaebbx
1hkk_A_3371hkk   A340357FKTKVSYLKQKGLGGAMVHHHHHHHHHHTT-SEEEEaaaaaaaaaaavxaebbb
1ji2_A_3011ji2   A307324LFDVARFWMEQGIDGWRLHHHHHHHHHHTT--EEEEaaaaaaaaaaavxaebbx
1jnd_A_1051jnd   A112129IRSAYELVKTYGFDGLDLHHHHHHHHHHTT-SEEEEaaaaaaaaaaavxaebbx
1jnd_A_3731jnd   A376393ASNKAAYARVKNLGGVALHHHHHHHHHHTT-SEEEEaaaaaaaaaaalxaebbb
1kfw_A_3911kfw   A394411TKQKTDYIVSKGLGGGMWHHHHHHHHHHTT--EEEEaaaaaaaaaaavxaebbb
1qho_A_2041qho   A210227LTDAAVQLVAHGADGLRIHHHHHHHHHHTT--EEEEaaaaaaaaaaagpaebbx
3pmg_A_953pmg   A95112TPAVSCIIRKIKAIGGIIHHHHHHHHHHHT-SEEEEaaaaaaaaaaalxaebbb
8abp_*_438abp   -4663TLNAIDSLAASGAKGFVIHHHHHHHHHHTT--EEEEaaaaaaaaaaavxaebxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hkk_A_1131hkk   A     ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS N - 115
1hkk_A_1131hkk   A     ZNZINC ION N - 115
1hkk_A_1131hkk   A     AMIALLOSAMIZOLINE D - 136
1hkk_A_1131hkk   A     AMIALLOSAMIZOLINE D - 138
1hkk_A_3371hkk   A     AMIALLOSAMIZOLINE M - 356
1hkk_A_3371hkk   A     NAAN-ACETYL-D-ALLOSAMINE W - 358
1hkk_A_3371hkk   A     AMIALLOSAMIZOLINE W - 358
1qho_A_2041qho   A     ABDACARBOSE DERIVED HEXASACCHARIDE R - 226
3pmg_A_953pmg   A     MGMAGNESIUM ION T - 95
8abp_*_438abp   *     GLAALPHA D-GALACTOSE C - 64
8abp_*_438abp   *     GLBBETA-D-GALACTOSE C - 64
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hkk_A_1131hkk   A AC8ZN2 BINDING SITE FOR CHAIN AN - 115
1hkk_A_3371hkk   A AC2NAA BINDING SITE FOR CHAIN AW - 358

Clusters included in this Subclass
CLUSTER: HE.4.30