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Information on SUBCLASS 5.8.1
Subclass Accession number: 1882
Subclass: 5.8.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.1 (>75 %)  2.7.1.37
GO : GO:0004672 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0017076 (>75 %)  GO:0030554 (>75 %)  
SCOP : 56111 (>75 %)  56112 (>75 %)  88854 (>75 %)  
 Number of loops: 12

Average sequence ID (%) : 39.8 +/- 25.3
Average RMSD (Å) : 0.325 +/- 0.142

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: hXDFGhhpX
(φψ)-conformation: bblaaapbp
Pattern: [kqry][ILV][acimtv][D][FLW][EG][filmwy][ASTV][cehkrst]x
Conservation:-0.3430.367-0.7011.9870.7740.917-0.862-0.083-0.978-1.077
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1csn_*_1501csn   -151160YVVDFGMVKFEE---TT-EEbbbvaaaxbx
1jks_A_1571jks   A158167KIIDFGLAHKEE---TT-EEbxblaaaxbx
1k9a_A_3281k9a   A329338KVSDFGLTKEEE---TT-EEbxblaaaxbx
1m2r_A_1701m2r   A172181RLIDWGLAEFEE---TT-EEbxblaaaxbx
1mq4_A_2701mq4   A271280KIADFGWSVHEE--GGG-EEbxbvaaaxbx
1nvr_A_1441nvr   A145154KISDFGLATVEE---TT-EEbxbvaaaxbx
1nw1_A_2981nw1   A298307VLIDFEYASYEE---TT-EEbbblaaaxbx
1o6y_A_1521o6y   A153162KVMDFGIARAEE---TT-EEbxbvaaapbx
1phk_*_1631phk   -164173KLTDFGFSCQEE---TT-EEbxblaaaxbx
1q41_A_1961q41   A197206KLCDFGSAKQEE---TT-EEbxbvaaaxbx
1q8y_A_5431q8y   A547556KIADLGNACWEE---TT-EEbxblaaaxbx
1rdq_E_1801rdq   E181190QVTDFGFAKREE---TT-EEbxbvaaaxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE V - 153
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 154
1csn_*_1501csn   *     MGMAGNESIUM ION D - 154
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE R - 172
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE I - 174
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE D - 175
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE A - 273
1mq4_A_2701mq4   A     MGMAGNESIUM ION D - 274
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE D - 274
1mq4_A_2701mq4   A     MGMAGNESIUM ION F - 275
1mq4_A_2701mq4   A     MGMAGNESIUM ION G - 276
1mq4_A_2701mq4   A     MGMAGNESIUM ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION S - 278
1mq4_A_2701mq4   A     PO4PHOSPHATE ION V - 279
1nvr_A_1441nvr   A     STUSTAUROSPORINE S - 147
1nvr_A_1441nvr   A     STUSTAUROSPORINE D - 148
1nvr_A_1441nvr   A     STUSTAUROSPORINE F - 149
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER M - 155
1o6y_A_1521o6y   A     MGMAGNESIUM ION M - 155
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 156
1o6y_A_1521o6y   A     MGMAGNESIUM ION D - 156
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 158
1o6y_A_1521o6y   A     MGMAGNESIUM ION G - 158
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 166
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 167
1phk_*_1631phk   *     MNMANGANESE (II) ION D - 167
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 168
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 168
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE G - 169
1phk_*_1631phk   *     MNMANGANESE (II) ION G - 169
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 170
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 170
1q41_A_1961q41   A     IXM(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME C - 199
1q41_A_1961q41   A     IXM(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME D - 200
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE A - 549
1q8y_A_5431q8y   A     MGMAGNESIUM ION D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE L - 551
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE G - 552
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE N - 553
1rdq_E_1801rdq   E     MGMAGNESIUM ION T - 183
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE T - 183
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE T - 183
1rdq_E_1801rdq   E     PO4PHOSPHATE ION D - 184
1rdq_E_1801rdq   E     MGMAGNESIUM ION D - 184
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE D - 184
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE D - 184
1rdq_E_1801rdq   E     MGMAGNESIUM ION F - 185
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE F - 185
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE F - 185
1rdq_E_1801rdq   E     MGMAGNESIUM ION G - 186
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE G - 186
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE G - 186
1rdq_E_1801rdq   E     TPOPHOSPHOTHREONINE F - 187
1rdq_E_1801rdq   E     PO4PHOSPHATE ION F - 187
1rdq_E_1801rdq   E     MGMAGNESIUM ION F - 187
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE F - 187
1rdq_E_1801rdq   E     TPOPHOSPHOTHREONINE K - 189
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6y_A_1521o6y   A MG1MG BINDING SITE FOR CHAIN AD - 156

Clusters included in this Subclass
CLUSTER: AR.5.18