Information on SUBCLASS 5.36.1 |
Subclass Accession number: 1916
Subclass: 5.36.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004512 (>75 %) GO:0016853 (>75 %) GO:0016872 (>75 %) SCOP : 52008 (>75 %) 55346 (>75 %) 55347 (>75 %) 55368 (>75 %) 89562 (>75 %) 89563 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 21.1 +/- 16.3 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | phXhhcDpK |
(φψ)-conformation: | bbaaaeabp |
Pattern: | [DGK] | [HY] | [LMV] | [EGK] | [PW] | [LV] | [DG] | [D] | [KRS] | [K] | [FVW] | [AI] | [AMY] | x | [EHR] | [ILY] | [EY] | x | x |
Conservation: | -0.793 | 1.712 | 0.080 | -0.721 | 0.154 | 0.273 | 0.367 | 2.482 | -0.284 | 1.827 | -0.357 | -0.312 | -0.866 | -0.866 | -0.138 | -0.357 | -0.106 | -0.939 | -1.157 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gr0_A_273 | 1gr0 | A | 275 | 293 | DHVGWLDDRKWAYVRLEGR | EE-GGGTTEEEEEEEEEEE | bxbaaaeaxbbbbbbbbbb |
1p1j_A_397 | 1p1j | A | 403 | 421 | KYMKPVGDSKVAMDEYYSE | EE-GGGTTEEEEEEEEEEE | bxbaaaeaxpbbbbbbbbx |
1vjp_A_281 | 1vjp | A | 281 | 299 | GYLEPLGDKKFIAIHIEYV | EE-GGGTTEEEEEEEEEEE | xbbaaaeabxxbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gr0_A_273 | 1gr0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 282 |
1gr0_A_273 | 1gr0 | A | ZNZINC ION | D - 282 |
1p1j_A_397 | 1p1j | A | CRYPROPANE-1,2,3-TRIOL | V - 401 |
1p1j_A_397 | 1p1j | A | CRYPROPANE-1,2,3-TRIOL | I - 402 |
1p1j_A_397 | 1p1j | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | D - 410 |
1p1j_A_397 | 1p1j | A | PO4PHOSPHATE ION | K - 412 |
1p1j_A_397 | 1p1j | A | CRYPROPANE-1,2,3-TRIOL | K - 412 |
1p1j_A_397 | 1p1j | A | PO4PHOSPHATE ION | A - 414 |
1vjp_A_281 | 1vjp | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 288 |
1vjp_A_281 | 1vjp | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | K - 290 |
Clusters included in this Subclass |
CLUSTER: AR.5.197 |