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Information on SUBCLASS 8.4.1
Subclass Accession number: 1987
Subclass: 8.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.1 (>75 %)  2.7.1.1123.4 (>75 %)  3.4.21 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0004672 (>75 %)  GO:0004714 (>75 %)  GO:0004872 (>75 %)  GO:0004888 (>75 %)  GO:0005524 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0019199 (>75 %)  
SCOP : 48725 (>75 %)  48726 (>75 %)  48942 (>75 %)  49159 (>75 %)  50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  
 Number of loops: 12

Average sequence ID (%) : 29.6 +/- 22.3
Average RMSD (Å) : 0.458 +/- 0.168

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pphXXXpXPhQh
(φψ)-conformation: bppppgabaapb
Pattern: [kqrstwy][DEKNT][ACST]x[ailptv]x[aekqrs]x[P][FHWY][mq][ALV]x[ilv]x
Conservation:-0.7820.1680.203-0.780-0.840-0.001-0.568-0.8412.8731.2180.4550.093-0.5280.175-0.844
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7s_*_51a7s   -519RKARPRQFPFLASIQEE--TTSSTTEEEEEbxxxpvabaaxbbbb
1azz_A_201azz   A2034VEAVPNSWPHQAALFEE--TTSSTTEEEEEbxxxplabaaxbbbb
1bio_*_201bio   -2034REAEAHARPYMASVQEE--TTS-TTEEEEEbxxxpvabaaxbbxb
1cgh_A_201cgh   A2034RESRPHSRPYMAYLQEE--TTSSTTEEEEEbxxxwvabaaxbbbb
1eq9_A_201eq9   A2034KDAPVGKYPYQVSLREE--TTS-TTEEEEEbxxxxvabaaxbbxb
1fjs_A_201fjs   A2034QECKDGECPWQALLIEE--TTS-TTEEEEEbxxxpvabaaxbbxb
1gvz_A_201gvz   A2034WECEKHSKPWQVAVYEE--TTSSTTEEEEEbxxpxvabaaxbbbb
1h8d_H_201h8d   H2034SDAEIGMSPWQVMLFEE--TTS-TTEEEEEbxxxxvabaaxbxxb
1m9u_A_201m9u   A2034TNASPGEFPWQLSQQEE--TTSSTTEEEEEbxxbpvabaaxbbbx
1p57_B_201p57   B2034RDTSLGRWPWQVSLREE--TTSSTTEEEEEbxbbpvabaaxbbbb
1s83_A_201s83   A2034YTCAANSIPYQVSLNEE--TTSSTTEEEEEbxxxpvabaaxbbxb
2hlc_A_202hlc   A2034YEAYTGLFPYQAGLDEE--TTTSTTEEEEEbxxbxgabaaxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7s_*_51a7s   *     NAGN-ACETYL-D-GLUCOSAMINE R - 5
1a7s_*_51a7s   *     EOHETHANOL R - 8
1a7s_*_51a7s   *     EOHETHANOL P - 9
1a7s_*_51a7s   *     EOHETHANOL R - 10
1a7s_*_51a7s   *     EOHETHANOL Q - 11
1a7s_*_51a7s   *     EOHETHANOL F - 12
1a7s_*_51a7s   *     EOHETHANOL P - 13
1a7s_*_51a7s   *     EOHETHANOL F - 14
1a7s_*_51a7s   *     EOHETHANOL L - 15
1a7s_*_51a7s   *     EOHETHANOL Q - 19
1gvz_A_201gvz   A     GOLGLYCEROL S - 26
1gvz_A_201gvz   A     GOLGLYCEROL W - 29
1gvz_A_201gvz   A     GOLGLYCEROL A - 32
1gvz_A_201gvz   A     GOLGLYCEROL Y - 34
1h8d_H_201h8d   H     TYSSULFONATED TYROSINE K - 36
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvz_A_201gvz   A AC2GOL BINDING SITE FOR CHAIN AW - 29
1gvz_A_201gvz   A AC3GOL BINDING SITE FOR CHAIN AY - 34

Clusters included in this Subclass
CLUSTER: AR.7.4