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Information on SUBCLASS 8.8.1
Subclass Accession number: 1991
Subclass: 8.8.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.10 (>50 %)  1.10.3 (>50 %)  
GO : GO:0005507 (>75 %)  GO:0005529 (>75 %)  GO:0005529 (>75 %)  GO:0016679 (>50 %)  GO:0016682 (>50 %)  GO:0030246 (>75 %)  GO:0030246 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  49898 (>75 %)  49899 (>75 %)  49932 (>75 %)  50352 (>75 %)  50370 (>75 %)  50371 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 32.5 +/- 20.8
Average RMSD (Å) : 0.650 +/- 0.238

Consensus geometry
d (Å): 19 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pppXhPFppGpX
(φψ)-conformation: bbapbabbplbp
Pattern: x[ER][EQS][AKS]x[FM][P][F][EQT][DKPS][G][DKQS]x[AF][EKQ][ILTV][CQST][IV]x[FV]
Conservation:-0.5490.223-0.309-0.485-1.0760.4762.3901.864-0.291-0.8301.864-0.633-1.1590.0010.121-0.469-0.8630.587-0.602-0.260
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3k_*_1851a3k   -185204ERQSVFPFESGKPFKIQVLVEEE------TT-EEEEEEEEbbbaxbaxbpvbxbbbbbbx
1g86_A_761g86   A7695VESKNMPFQDGQEFELSISVEEE------TT--EEEEEEEbbbaxbaxxpvbxbbbbbbx
1gzw_A_721gzw   A7291QREAVFPFQPGSVAEVCITFEE-S-----TTSEEEEEEEEbbxabbabbpvbxbbbbbbx
1is3_A_731is3   A7392ERSKKFPFTKGDHFQTTITFEEE------TTSEEEEEEEEbbbaxbabbpvbxbbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a3k_*_1851a3k   *     NAGN-ACETYL-D-GLUCOSAMINE R - 186
1g86_A_761g86   A     NEQN-ETHYLMALEIMIDE D - 85
1g86_A_761g86   A     NEQN-ETHYLMALEIMIDE G - 86
1g86_A_761g86   A     NEQN-ETHYLMALEIMIDE Q - 87
1gzw_A_721gzw   A     BGCBETA-D-GLUCOSE R - 73
1gzw_A_721gzw   A     SEO2-MERCAPTOETHANOL E - 86
1gzw_A_721gzw   A     CSOS-HYDROXYCYSTEINE V - 87
1gzw_A_721gzw   A     SEO2-MERCAPTOETHANOL V - 87
1gzw_A_721gzw   A     CSOS-HYDROXYCYSTEINE C - 88
1gzw_A_721gzw   A     SEO2-MERCAPTOETHANOL C - 88
1gzw_A_721gzw   A     CSOS-HYDROXYCYSTEINE I - 89
1gzw_A_721gzw   A     CSOS-HYDROXYCYSTEINE T - 90
1gzw_A_721gzw   A     CSOS-HYDROXYCYSTEINE F - 91
1is3_A_731is3   A     LATLACTOSE R - 74
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gzw_A_721gzw   A SA1SEO BINDING SITE FOR CHAIN AE - 86
1gzw_A_721gzw   A SA1SEO BINDING SITE FOR CHAIN AC - 88

Clusters included in this Subclass
CLUSTER: AR.9.15