Information on SUBCLASS 16.1.1 |
Subclass Accession number: 200
Subclass: 16.1.1 Type: HH alpha-alpha DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 83.3 +/- 0.4 Average RMSD (Å) : 0.34 +/- 0.04 Consensus geometry
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Consensus Sequence: | VDNPGHPhIXTVGhVAGDEE |
(φψ)-conformation: | aabaebaappbalbbpabaa |
Pattern: | [LV] | [D] | [DQ] | [CV] | [I] | [Q] | [T] | [G] | [V] | [D] | [N] | [P] | [G] | [H] | [P] | [FY] | [I] | [KM] | [T] | [V] | [G] | [CM] | [V] | [A] | [G] | [D] | [E] | [E] | [ST] | [Y] | [DE] | [V] |
Conservation: | -1.526 | 0.780 | -1.347 | -1.437 | -0.541 | 0.119 | 0.119 | 0.780 | -0.541 | 0.780 | 0.780 | 1.440 | 0.780 | 2.101 | 1.440 | -0.064 | -0.541 | -1.858 | 0.119 | -0.541 | 0.780 | -1.135 | -0.541 | -0.541 | 0.780 | 0.780 | 0.119 | 0.119 | -1.379 | 1.440 | -0.724 | -0.541 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g0w_A_53 | 1g0w | A | 53 | 84 | VDDVIQTGVDNPGHPYIMTVGCVAGDEESYDV | HHHHHHHHHH----SS--B-----SSTTHHHH | aaaaaaaaaabaebaabxbavbbxabaaaaaa |
1qh4_A_53 | 1qh4 | A | 53 | 84 | LDDVIQTGVDNPGHPFIMTVGCVAGDEESYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaaxxbavbbxabaaaaaa |
1qk1_A_48 | 1qk1 | A | 48 | 79 | LDQCIQTGVDNPGHPFIKTVGMVAGDEETYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaaxxbavbbxabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | M - 70 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | T - 71 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | V - 72 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | G - 73 |
Clusters included in this Subclass |
CLUSTER: HH.17.0 |