|
|
|
|
|
|
|
| Information on SUBCLASS 3.2.8 |
|
Subclass Accession number: 200
Subclass: 3.2.8 
Type: HE alpha-beta DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
Conserved Annotation EC : 1 (>75 %) GO : GO:0000287 (>50 %) GO:0000287 (>75 %) SCOP : 53222 (>75 %) 53223 (>75 %) 53224 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 5.6 +/- 8.7 Average RMSD (Å) : 0.800 +/- 0.271 Consensus geometry
|
| Consensus Sequence: | ppcXphh |
| (φψ)-conformation: | aalppbb |
| Pattern: | [AILT] | x | x | [ILY] | [AKL] | [DEKQ] | [DHRS] | [GK] | x | [EHPT] | [AILM] | [AITV] |
| Conservation: | -0.215 | -1.064 | -1.630 | 1.282 | -0.280 | 1.482 | -0.215 | 1.220 | -1.064 | -0.404 | 0.539 | 0.350 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1cbf_*_170 | 1cbf | - | 170 | 181 | LTDLAKHKCTIA | HHHHHTT-SEEE | aaaaaaalbxbb |
| 1j7j_A_11 | 1j7j | A | 26 | 37 | TERYKDSGSEMV | HHHHHTT-S-EE | aaaaaaagxxbb |
| 1toa_A_227 | 1toa | A | 234 | 245 | AAFIAQRKLPAI | HHHHHHTT-SEE | aaaaaaalxwbb |
| 2fok_A_160 | 2fok | A | 165 | 176 | ILTLLEDGQHLT | HHHHHTT---EE | aaaaaaavpbbx |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1cbf_*_170 | 1cbf | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 182 |
| 1cbf_*_170 | 1cbf | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 183 |
| 1j7j_A_11 | 1j7j | A | MGMAGNESIUM ION | L - 41 |
| Clusters included in this Subclass |
| CLUSTER: HE.5.108 |
| For any comment or web-related incidence, send an email to the webmaster. |
|