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Information on SUBCLASS 1.1.8
Subclass Accession number: 2032
Subclass: 1.1.8 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 11.0 +/- 14.2
Average RMSD (Å) : 0.536 +/- 0.162

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXXXX
(φψ)-conformation: aapaa
Pattern: [adekrst]x[acfilmtv]x[aegknqrst]x[DEKPQRST]x[afgilvw]x
Conservation:-0.032-0.5671.482-0.4720.375-1.2221.915-0.727-0.648-0.104
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6q_*_661a6q   -7786DHITNNQDFKHHHHTSHHHHaaaaabaaaa
1fqi_A_3001fqi   A301310SELIRDPKGRHHHHTSHHHHaaaaabaaaa
1glq_A_1741glq   A181190ARLSARPKIKHHHHTSHHHHaaaaapaaaa
1gnw_A_1921gnw   A199208AEITKRPASEHHHHSSHHHHaaaaaxaaaa
1iir_A_3561iir   A363372LATALTPETHHHHHTSHHHHaaaaaxaaaa
1j8u_A_2911j8u   A291300VPLFSDRSFAHHHHTSHHHHaaaaaxaaaa
1k0d_A_3321k0d   A339348KHMMRRPAVIHHHHT-HHHHaaaaaxaaaa
1k3y_A_1791k3y   A186195TRISNLPTVKHHHHHSHHHHaaaaapaaaa
1kiy_A_291kiy   A4453AHHFAQPRQQHHHHTSHHHHaaaaaxaaaa
1m0u_A_2221m0u   A229238DAVNALEPIKHHHHTSHHHHaaaaaxaaaa
1m8z_A_8531m8z   A854863MEFSQDQHGSHHHHTSHHHHaaaaaxaaaa
1nof_A_2121nof   A212221DPVLKDSDASHHHHT-HHHHaaaaabaaaa
1nq7_A_2551nq7   A275284EFAKRITGFMHHHHT-HHHHaaaaaxaaaa
1ogs_A_2901ogs   A293302KVVLTDPEAAHHHHTSHHHHaaaaabaaaa
1okt_A_1841okt   A191200EFISNLPNIKHHHHTSHHHHaaaaaxaaaa
1omw_A_551omw   A5665EKIFSQKLGYHHHHTSHHHHaaaaabaaaa
1rql_A_531rql   A5867RALTEMPRIAHHHHT-HHHHaaaaaxaaaa
1up8_A_1831up8   A191200DQLNGLEWFNHHHHTSHHHHaaaaabaaaa
1upk_A_1481upk   A148157RECIRHEPLAHHHHTSHHHHaaaaabaaaa
1vjg_A_1851vjg   A193202RIVENWDAWLHHHHT-HHHHaaaaaxaaaa
2gsq_*_1752gsq   -182191KRVAECPKIAHHHHTSHHHHaaaaaxaaaa
2gst_A_1782gst   A185194ARFEGLKKISHHHHTSHHHHaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fqi_A_3001fqi   A     MSESELENOMETHIONINE F - 300
1fqi_A_3001fqi   A     MSESELENOMETHIONINE I - 304
1fqi_A_3001fqi   A     MSESELENOMETHIONINE K - 308
1fqi_A_3001fqi   A     MSESELENOMETHIONINE S - 312
1fqi_A_3001fqi   A     MSESELENOMETHIONINE F - 313
1fqi_A_3001fqi   A     MSESELENOMETHIONINE L - 317
1kiy_A_291kiy   A     EDO1,2-ETHANEDIOL L - 55
1nq7_A_2551nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID C - 262
1nq7_A_2551nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID Q - 265
1nq7_A_2551nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID I - 266
1nq7_A_2551nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID A - 269
1nq7_A_2551nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID Y - 272
1upk_A_1481upk   A     MSESELENOMETHIONINE R - 148
1upk_A_1481upk   A     MSESELENOMETHIONINE E - 149
1upk_A_1481upk   A     MSESELENOMETHIONINE C - 150
1upk_A_1481upk   A     MSESELENOMETHIONINE I - 151
1vjg_A_1851vjg   A     MSESELENOMETHIONINE W - 198

Clusters included in this Subclass
CLUSTER: HH.1.27
CLUSTER: HH.2.70
CLUSTER: HH.3.28