Information on SUBCLASS 1.1.18 |
Subclass Accession number: 2042
Subclass: 1.1.18 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 5.2 +/- 8.0 Average RMSD (Å) : 0.667 +/- 0.151 Consensus geometry
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Consensus Sequence: | pccXp |
(φψ)-conformation: | aapaa |
Pattern: | [acdv] | x | [cnqr] | [ailt] | [HQRSTY] | [aqrt] | [dgk] | [dgn] | [aknrs] | [dekn] | [ktwy] | x | [adgkn] | [acilm] |
Conservation: | -0.849 | -1.261 | -0.572 | 0.321 | 0.748 | 0.528 | -0.366 | 1.667 | 0.678 | 1.082 | 0.560 | -1.677 | -1.261 | 0.401 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ash_*_59 | 1ash | - | 74 | 87 | VLCATYDDRETFNA | HHHHTTTSHHHHHH | aaaaaaabaaaaaa |
1fxx_A_437 | 1fxx | A | 450 | 463 | LVQQYADDKEKVAL | HHHHTSS-HHHHHH | aaaaaaapaaaaaa |
1kxp_D_273 | 1kxp | D | 286 | 299 | CDNLSTKNSKFEDC | HHHHTTTSHHHHHH | aaaaaaabaaaaaa |
1mty_D_171 | 1mty | D | 171 | 184 | ARRTRTIGPLWKGM | HHHHGGGSSHHHHH | aaaaaaaxaaaaaa |
1mwm_A_219 | 1mwm | A | 224 | 237 | DIIIHRKDNNYLKQ | HHHHTTT-HHHHHH | aaaaaaabaaaaaa |
1uiu_A_417 | 1uiu | A | 418 | 431 | DFQAQQGLADKPLI | HHHHTTT-TTHHHH | aaaaaaaxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.3.241 |
CLUSTER: HH.4.269 |
CLUSTER: HH.5.137 |