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Information on SUBCLASS 1.1.18
Subclass Accession number: 2042
Subclass: 1.1.18 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 5.2 +/- 8.0
Average RMSD (Å) : 0.667 +/- 0.151

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pccXp
(φψ)-conformation: aapaa
Pattern: [acdv]x[cnqr][ailt][HQRSTY][aqrt][dgk][dgn][aknrs][dekn][ktwy]x[adgkn][acilm]
Conservation:-0.849-1.261-0.5720.3210.7480.528-0.3661.6670.6781.0820.560-1.677-1.2610.401
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ash_*_591ash   -7487VLCATYDDRETFNAHHHHTTTSHHHHHHaaaaaaabaaaaaa
1fxx_A_4371fxx   A450463LVQQYADDKEKVALHHHHTSS-HHHHHHaaaaaaapaaaaaa
1kxp_D_2731kxp   D286299CDNLSTKNSKFEDCHHHHTTTSHHHHHHaaaaaaabaaaaaa
1mty_D_1711mty   D171184ARRTRTIGPLWKGMHHHHGGGSSHHHHHaaaaaaaxaaaaaa
1mwm_A_2191mwm   A224237DIIIHRKDNNYLKQHHHHTTT-HHHHHHaaaaaaabaaaaaa
1uiu_A_4171uiu   A418431DFQAQQGLADKPLIHHHHTTT-TTHHHHaaaaaaaxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 60
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 64
1ash_*_591ash   *     OXYOXYGEN MOLECULE Q - 64
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE K - 67
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 68
1ash_*_591ash   *     OXYOXYGEN MOLECULE I - 68
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 71
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE C - 72
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 75
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 88
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 92
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 95
1ash_*_591ash   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 96
1ash_*_591ash   *     OXYOXYGEN MOLECULE H - 96
1mwm_A_2191mwm   A     ADPADENOSINE-5'-DIPHOSPHATE S - 219
1mwm_A_2191mwm   A     ADPADENOSINE-5'-DIPHOSPHATE D - 223
1mwm_A_2191mwm   A     ADPADENOSINE-5'-DIPHOSPHATE I - 226
1mwm_A_2191mwm   A     ADPADENOSINE-5'-DIPHOSPHATE I - 227
1mwm_A_2191mwm   A     ADPADENOSINE-5'-DIPHOSPHATE R - 229

Clusters included in this Subclass
CLUSTER: HH.3.241
CLUSTER: HH.4.269
CLUSTER: HH.5.137