Logo
Information on SUBCLASS 1.1.26
Subclass Accession number: 2050
Subclass: 1.1.26 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004096 (>75 %)  GO:0004601 (>75 %)  GO:0016684 (>75 %)  
SCOP : 48112 (>75 %)  48113 (>75 %)  74753 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 7.4 +/- 9.1
Average RMSD (Å) : 0.575 +/- 0.206

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXchp
(φψ)-conformation: aapaa
Pattern: xx[IK]x[DGKN]x[EFHY]xx
Conservation:-1.4520.1311.6160.0710.552-0.5701.113-1.131-0.330
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a99_A_1611a99   A161169DLILKPENLHHHHSHHHHaaaabaaaa
1d3y_A_3031d3y   A312320GLKNDDFVRHHHH-HHHHaaaaxaaaa
1ezv_C_31ezv   C311FRKSNVYLSHHHHSHHHHaaaaxaaaa
1fs7_A_2791fs7   A282290LYKTGIHGQHHHHSHHHHaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ezv_C_31ezv   C     UQ65-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18, 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL Y - 16
1ezv_C_31ezv   C     UQ65-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18, 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL I - 17
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 279
1fs7_A_2791fs7   A     CACALCIUM ION D - 279
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 280
1fs7_A_2791fs7   A     CACALCIUM ION W - 280
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 281
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 283
1fs7_A_2791fs7   A     CACALCIUM ION Y - 283
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 284
1fs7_A_2791fs7   A     ACTACETATE ION G - 286
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 287
1fs7_A_2791fs7   A     CACALCIUM ION I - 287
1fs7_A_2791fs7   A     ACTACETATE ION I - 287
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 288
1fs7_A_2791fs7   A     CACALCIUM ION H - 288
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 289

Clusters included in this Subclass
CLUSTER: HH.2.110