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Information on SUBCLASS 1.1.50
Subclass Accession number: 2074
Subclass: 1.1.50 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0016798 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 15.6 +/- 0.0
Average RMSD (Å) : 0.700 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XppXX
(φψ)-conformation: aapaa
Pattern: x[LV][D][AT][L][AM][LT][LM][SY]x[NS][SY][PT]x[RY][AK][ES][EY][F][ES][AG][E][IL][EQ][RT]x[EL][HL][MW][AI][NR][D]
Conservation:-1.144-0.0882.377-0.2640.968-0.616-0.6160.440-0.616-0.7920.264-0.616-0.088-0.968-0.440-0.616-0.264-0.4402.377-0.264-0.0881.6730.2640.616-0.440-0.792-1.321-0.7920.616-0.7920.0882.377
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl2_A_841dl2   A87118SVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDHHHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHaaaaaaaaaaaxaaaaaaaaaaaaaaaaaaaa
1qus_A_1741qus   A174205ILDALATLSFNYPRRAEYFSGELETFLLMARDHHHHHHHHHHS-GGGHHHHHHHHHHHHHHHHHaaaaaaaaaaabaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dl2_A_841dl2   A     NAGN-ACETYL-D-GLUCOSAMINE L - 93
1dl2_A_841dl2   A     NAGN-ACETYL-D-GLUCOSAMINE N - 96
1dl2_A_841dl2   A     NAGN-ACETYL-D-GLUCOSAMINE S - 97
1dl2_A_841dl2   A     NAGN-ACETYL-D-GLUCOSAMINE N - 117
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL R - 188
1qus_A_1741qus   A     BCNBICINE Y - 191
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL Y - 191
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL F - 192

Clusters included in this Subclass
CLUSTER: HH.4.231