Information on SUBCLASS 1.2.16 |
Subclass Accession number: 2094
Subclass: 1.2.16 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4.21 (>75 %) 3.4.21.97 (>75 %) 5.3 (>50 %) 5.3.1 (>50 %) 5.3.1.1 GO : GO:0004807 (>50 %) GO:0016853 (>50 %) GO:0016860 (>50 %) GO:0016861 (>50 %) SCOP : 50788 (>75 %) 50789 (>75 %) 50790 (>75 %) 51350 (>50 %) 51351 (>50 %) 51352 (>50 %) |
Number of loops: 7 Average sequence ID (%) : 9.5 +/- 10.7 Average RMSD (Å) : 0.614 +/- 0.186 Consensus geometry
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Consensus Sequence: | XXpXp |
(φψ)-conformation: | aabaa |
Pattern: | x | x | x | x | [ans] | [ADGNRT] | x | [CDHNS] | x | [EGKNR] | [gilw] | [ampy] | x | [akl] | [ALMY] |
Conservation: | -1.029 | -1.218 | -0.181 | -0.673 | 1.520 | -0.141 | -0.883 | 1.590 | -0.640 | 1.556 | -0.849 | 0.237 | -0.764 | 0.573 | 0.902 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dar_*_206 | 1dar | - | 217 | 231 | VEVAADFDENIMLKY | HHHHTTT-HHHHHHH | aaaaaaabaaaaaaa |
1fm0_D_28 | 1fm0 | D | 32 | 46 | RQHMAAQSDRWALAL | HHHHHTT-HHHHHHH | aaaaaaabaaaaaaa |
1fs1_A_129 | 1fs1 | A | 129 | 143 | LLKVSGVCKRWYRLA | HHHHHTT-HHHHHHH | aaaaaaabaaaaaaa |
1iq8_A_328 | 1iq8 | A | 332 | 346 | VDERARSHPKLYSAY | HHHHHTT-HHHHHHH | aaaaaaabaaaaaaa |
1mba_*_60 | 1mba | - | 73 | 87 | EFVNNAANAGKMSAM | HHHHHTT-HHHHHHH | aaaaaaabaaaaaaa |
1qcz_A_123 | 1qcz | A | 134 | 148 | AQILATHDKELHQRL | HHHHHTT-HHHHHHH | aaaaaaabaaaaaaa |
1ujk_A_27 | 1ujk | A | 33 | 47 | FCEQLNEDFEGPPLA | HHHHHTSSTTHHHHH | aaaaaaabaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 63 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 66 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 67 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 68 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 70 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 71 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 74 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 91 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 94 |
1mba_*_60 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 95 |
1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 126 |
1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 129 |
1ujk_A_27 | 1ujk | A | IODIODIDE ION | R - 49 |
1ujk_A_27 | 1ujk | A | IODIODIDE ION | L - 50 |
1ujk_A_27 | 1ujk | A | IODIODIDE ION | L - 51 |
1ujk_A_27 | 1ujk | A | IODIODIDE ION | H - 53 |
1ujk_A_27 | 1ujk | A | IODIODIDE ION | K - 54 |
Clusters included in this Subclass |
CLUSTER: HH.2.149 |
CLUSTER: HH.3.106 |
CLUSTER: HH.3.247 |
CLUSTER: HH.4.240 |
CLUSTER: HH.4.33 |