Information on SUBCLASS 1.2.27 |
Subclass Accession number: 2105
Subclass: 1.2.27 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005515 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 3.7 +/- 7.5 Average RMSD (Å) : 0.633 +/- 0.115 Consensus geometry
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Consensus Sequence: | pXphX |
(φψ)-conformation: | aabaa |
Pattern: | [FPV] | x | x | [QSY] | [FIL] | [KRS] | x | [ENQ] | [APV] | x | [FL] | [DST] | [QTY] | x | [LVY] | [DRY] | [FHK] | x |
Conservation: | -1.205 | -1.505 | 0.089 | -0.152 | 1.050 | 0.749 | -0.904 | 1.351 | -0.303 | -0.904 | 2.500 | 0.599 | -0.303 | 0.148 | 0.299 | -1.054 | -0.303 | -0.152 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1n1c_A_36 | 1n1c | A | 41 | 58 | FWEQLSLEANFTQSVDKI | HHHHHHTSTTTHHHHHHH | aaaaaaaxaaaaaaaaaa |
1pb7_A_180 | 1pb7 | A | 181 | 198 | VDIYFRRQVELSTMYRHM | HHHHHHT-GGGHHHHHHH | aaaaaaabaaaaaaaaaa |
1vj5_A_369 | 1vj5 | A | 369 | 386 | PLESIKANPVFDYQLYFQ | HHHHHHT-GGGHHHHHHH | aaaaaaabaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1n1c_A_36 | 1n1c | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | A - 37 |
1n1c_A_36 | 1n1c | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | A - 38 |
1n1c_A_36 | 1n1c | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | F - 41 |
1n1c_A_36 | 1n1c | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | W - 42 |
1pb7_A_180 | 1pb7 | A | GLYGLYCINE | S - 180 |
1pb7_A_180 | 1pb7 | A | GLYGLYCINE | V - 181 |
1vj5_A_369 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | F - 379 |
1vj5_A_369 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | Y - 381 |
1vj5_A_369 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | Q - 382 |
1vj5_A_369 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | F - 385 |
Clusters included in this Subclass |
CLUSTER: HH.6.122 |