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Information on SUBCLASS 1.3.6
Subclass Accession number: 2126
Subclass: 1.3.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
 Number of loops: 9

Average sequence ID (%) : 13.9 +/- 16.3
Average RMSD (Å) : 0.544 +/- 0.159

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXchX
(φψ)-conformation: aalaa
Pattern: x[anqs]xx[GNR][afiltv][afiklt][DEHRSW]x
Conservation:-0.8250.317-0.628-0.6422.4700.012-0.4690.059-0.295
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c1k_A_1581c1k   A165173DSFLNIIDKHHHH-HHHHaaaalaaaa
1esc_*_1051esc   -105113GNTLGFNRIHHHHTHHHHaaaavaaaa
1gpq_A_1061gpq   A113121AALTGSLENHHHHSHHHHaaaagaaaa
1icr_A_1691icr   A173181DAEFGLKEKHHHHTHHHHaaaalaaaa
1imj_A_451imj   A4856WQNLGTLHRHHHHTHHHHaaaavaaaa
1j9a_A_631j9a   A6977HSENGLIERHHHHTHHHHaaaagaaaa
1mx3_A_1251mx3   A138146NLYRRATWLHHHH-HHHHaaaalaaaa
1q7e_A_1421q7e   A146154QAAGGAASTHHHTTHHHHaaaagaaaa
1qv9_A_1471qv9   A148156LAATGVFRVHHHTTHHHHaaaavaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j9a_A_631j9a   A     MSESELENOMETHIONINE D - 63
1j9a_A_631j9a   A     MSESELENOMETHIONINE W - 64
1j9a_A_631j9a   A     MSESELENOMETHIONINE C - 65
1j9a_A_631j9a   A     MSESELENOMETHIONINE Q - 66
1j9a_A_631j9a   A     MSESELENOMETHIONINE H - 69
1j9a_A_631j9a   A     MSESELENOMETHIONINE I - 75
1j9a_A_631j9a   A     MSESELENOMETHIONINE I - 78
1mx3_A_1251mx3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 125
1mx3_A_1251mx3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 128
1q7e_A_1421q7e   A     MSESELENOMETHIONINE E - 142
1q7e_A_1421q7e   A     MSESELENOMETHIONINE N - 143
1q7e_A_1421q7e   A     MSESELENOMETHIONINE A - 145
1qv9_A_1471qv9   A     MSESELENOMETHIONINE V - 147
1qv9_A_1471qv9   A     MSESELENOMETHIONINE L - 148
1qv9_A_1471qv9   A     MSESELENOMETHIONINE A - 149
1qv9_A_1471qv9   A     MSESELENOMETHIONINE A - 150
1qv9_A_1471qv9   A     MSESELENOMETHIONINE T - 151
1qv9_A_1471qv9   A     MSESELENOMETHIONINE F - 154
1qv9_A_1471qv9   A     MSESELENOMETHIONINE V - 157
1qv9_A_1471qv9   A     MSESELENOMETHIONINE F - 161
1qv9_A_1471qv9   A     MGMAGNESIUM ION K - 167

Clusters included in this Subclass
CLUSTER: HH.1.49
CLUSTER: HH.2.84