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Information on SUBCLASS 1.3.16
Subclass Accession number: 2136
Subclass: 1.3.16 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 9.5 +/- 12.2
Average RMSD (Å) : 0.733 +/- 0.289

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: pXchX
(φψ)-conformation: aalaa
Pattern: xxxx[SY]x[DG][CIY]x[AKR][HKP][GKL]x[DKR]
Conservation:-0.197-0.275-0.275-1.1711.672-1.4281.9720.238-0.0600.4940.238-1.428-0.2750.494
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ee4_A_4181ee4   A422435RYLVSQGCIKPLCDHHHHHTT-HHHHHHaaaaaavaaaaaaa
1gqe_A_61gqe   A2033VLRGYLDYDAKKERHHHHHTTHHHHHHHaaaaaalaaaaaaa
1on3_A_3781on3   A378391VQQEYGGIIRHGAKHHHHHTTHHHHHHHaaaaaavaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gqe_A_61gqe   A     MSESELENOMETHIONINE L - 14
1gqe_A_61gqe   A     MSESELENOMETHIONINE S - 18
1gqe_A_61gqe   A     MSESELENOMETHIONINE R - 22
1gqe_A_61gqe   A     MSESELENOMETHIONINE Y - 24
1on3_A_3781on3   A     CDCADMIUM ION G - 383
1on3_A_3781on3   A     CDCADMIUM ION R - 387
1on3_A_3781on3   A     CDCADMIUM ION H - 388
1on3_A_3781on3   A     CDCADMIUM ION K - 391

Clusters included in this Subclass
CLUSTER: HH.3.273