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Information on SUBCLASS 2.1.5
Subclass Accession number: 2164
Subclass: 2.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 10.1 +/- 12.8
Average RMSD (Å) : 0.797 +/- 0.199

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXhXXX
(φψ)-conformation: aappaa
Pattern: xxxx[afgilmvw][dknpst]x[adegknqrst]x[afgiklv]x
Conservation:-0.583-1.1310.064-0.7300.6231.676-0.9500.348-0.4841.747-0.581
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a49_A_3701a49   A384394AEAAMFHRKLFHHHSS-HHHHHaaaaxbaaaaa
1brt_*_1801brt   -189199TAASGGFFAAAHHHHS-HHHHHaaaaxxaaaaa
1bw0_A_2931bw0   A302312ALLNTPQEHLDHHHSS-HHHHHaaaaxpaaaaa
1cg5_B_51cg5   B1424VWKDVDHKQITHHHHS-HHHHHaaaaxxaaaaa
1coj_A_1771coj   A184194FFKNINWDVVNHHHTBBHHHHHaaaaxxaaaaa
1cy5_A_131cy5   A1626LEKDIKTSYIMHHHH--HHHHHaaaaxxaaaaa
1din_*_781din   -8797LWQAFDMEAGVHHHT--HHHHHaaaaxxaaaaa
1eex_A_761eex   A7888EVMAMDSVKLAHHHHS-HHHHHaaaaxxaaaaa
1ey3_A_2181ey3   A228238KIANNSKIIVAHHHTS-HHHHHaaaaxpaaaaa
1ezv_A_4021ezv   A408418KIDAITVKDVKHHHT--HHHHHaaaaxbaaaaa
1f0k_A_3121f0k   A318328TLAGWSRETLLHHHT--HHHHHaaaabxaaaaa
1fx2_A_10671fx2   A10691079AYMSLSAEDRKHHHTS-HHHHHaaaaxxaaaaa
1hhs_A_3281hhs   A328338HDTFWPGWLRDHHHH--HHHHHaaaapxaaaaa
1hr6_B_1841hr6   B186196NIKSITRTDLKHHHH--HHHHHaaaapbaaaaa
1hr6_B_4111hr6   B417427QVDKITKDDIIHHHT--HHHHHaaaaxbaaaaa
1ih7_A_8561ih7   A862872VLHWMDYTVLLHHHHB-HHHHHaaaapxaaaaa
1jb0_A_6701jb0   A688698MFLFSGRGYWQHHHHS-HHHHHaaaabbaaaaa
1jp4_A_2911jp4   A294304YASRVPESVKSHHHHS-HHHHHaaaaxxaaaaa
1kek_A_1881kek   A191201MASLVNQKALAHHHHS-HHHHHaaaaxxaaaaa
1l8w_A_2131l8w   A222232AVSAVSGEQILHHHTS-HHHHHaaaabxaaaaa
1lf6_A_2541lf6   A263273ETLGEDYNNLKHHHHS-HHHHHaaaaxxaaaaa
1mpg_A_1581mpg   A160170RLAAADPQALKHHHT--HHHHHaaaaxxaaaaa
1mwv_A_681mwv   A7181AFEKLDLAAVKHHHTS-HHHHHaaaapxaaaaa
1orn_A_621orn   A6474DYIAVPLEELEHHHSS-HHHHHaaaabxaaaaa
1pkl_A_3391pkl   A353363AQSALNEYVFFHHHH--HHHHHaaaaxxaaaaa
1qvb_A_1131qvb   A119129LDELANKEAVNHHHHS-HHHHHaaaapxaaaaa
1rkq_A_1611rkq   A167177AIARIPQEVKEHHHHS-HHHHHaaaaxxaaaaa
1s3e_A_1401s3e   A142152EWDNMTMKELLHHHTSBHHHHHaaaabxaaaaa
1vim_A_11vim   A1525LRNHIDLETVGHHHH--HHHHHaaaapxaaaaa
2cb5_A_362cb5   A3747LDICLKRATVQHHHHB-HHHHHaaaapxaaaaa
3gcb_*_353gcb   -3646DDALLNKTRLQHHHHB-HHHHHaaaapxaaaaa
7req_A_4857req   A499509LRAERDPEKVKHHHHS-HHHHHaaaaxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bw0_A_2931bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) I - 314
1cg5_B_51cg5   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 28
1cg5_B_51cg5   B     HEMPROTOPORPHYRIN IX CONTAINING FE V - 31
1cg5_B_51cg5   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 32
1cy5_A_131cy5   A     ZNZINC ION R - 13
1cy5_A_131cy5   A     ZNZINC ION E - 14
1cy5_A_131cy5   A     ZNZINC ION E - 17
1cy5_A_131cy5   A     ZNZINC ION S - 23
1cy5_A_131cy5   A     ZNZINC ION Y - 24
1cy5_A_131cy5   A     ZNZINC ION M - 26
1cy5_A_131cy5   A     ZNZINC ION D - 27
1cy5_A_131cy5   A     ZNZINC ION H - 28
1cy5_A_131cy5   A     ZNZINC ION I - 30
1cy5_A_131cy5   A     ZNZINC ION D - 32
1din_*_781din   *     CSD3-SULFINOALANINE W - 88
1jb0_A_6701jb0   A     CACALCIUM ION S - 670
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A S - 670
1jb0_A_6701jb0   A     CACALCIUM ION A - 671
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A A - 671
1jb0_A_6701jb0   A     CACALCIUM ION Y - 672
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A Y - 672
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A G - 673
1jb0_A_6701jb0   A     CACALCIUM ION L - 674
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A L - 674
1jb0_A_6701jb0   A     CACALCIUM ION L - 675
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A L - 675
1jb0_A_6701jb0   A     BCRBETA-CAROTENE L - 675
1jb0_A_6701jb0   A     CACALCIUM ION F - 676
1jb0_A_6701jb0   A     CL2BETA CHLOROPHYLL A F - 676
1jb0_A_6701jb0   A     CACALCIUM ION L - 677
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A L - 677
1jb0_A_6701jb0   A     BCRBETA-CAROTENE L - 677
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A G - 678
1jb0_A_6701jb0   A     BCRBETA-CAROTENE G - 678
1jb0_A_6701jb0   A     CL2BETA CHLOROPHYLL A A - 679
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A A - 679
1jb0_A_6701jb0   A     BCRBETA-CAROTENE A - 679
1jb0_A_6701jb0   A     CACALCIUM ION H - 680
1jb0_A_6701jb0   A     CL2BETA CHLOROPHYLL A H - 680
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A H - 680
1jb0_A_6701jb0   A     CACALCIUM ION F - 681
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A F - 681
1jb0_A_6701jb0   A     BCRBETA-CAROTENE F - 681
1jb0_A_6701jb0   A     CACALCIUM ION I - 682
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A I - 682
1jb0_A_6701jb0   A     BCRBETA-CAROTENE I - 682
1jb0_A_6701jb0   A     CACALCIUM ION W - 683
1jb0_A_6701jb0   A     CL2BETA CHLOROPHYLL A W - 683
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A W - 683
1jb0_A_6701jb0   A     CACALCIUM ION A - 684
1jb0_A_6701jb0   A     CL2BETA CHLOROPHYLL A A - 684
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A A - 684
1jb0_A_6701jb0   A     CACALCIUM ION F - 685
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A F - 685
1jb0_A_6701jb0   A     CACALCIUM ION S - 686
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A S - 686
1jb0_A_6701jb0   A     CACALCIUM ION L - 687
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A L - 687
1jb0_A_6701jb0   A     CACALCIUM ION M - 688
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A M - 688
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE M - 688
1jb0_A_6701jb0   A     BCRBETA-CAROTENE M - 688
1jb0_A_6701jb0   A     CACALCIUM ION F - 689
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A F - 689
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE F - 689
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE L - 690
1jb0_A_6701jb0   A     CACALCIUM ION F - 691
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A F - 691
1jb0_A_6701jb0   A     CACALCIUM ION S - 692
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A S - 692
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE S - 692
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE G - 693
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE R - 694
1jb0_A_6701jb0   A     CACALCIUM ION Y - 696
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A Y - 696
1jb0_A_6701jb0   A     CACALCIUM ION W - 697
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A W - 697
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE W - 697
1jb0_A_6701jb0   A     BCRBETA-CAROTENE W - 697
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE Q - 698
1jb0_A_6701jb0   A     CACALCIUM ION L - 700
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A L - 700
1jb0_A_6701jb0   A     BCRBETA-CAROTENE L - 700
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A I - 701
1jb0_A_6701jb0   A     PQNPHYLLOQUINONE I - 701
1jb0_A_6701jb0   A     BCRBETA-CAROTENE I - 701
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A S - 703
1jb0_A_6701jb0   A     CACALCIUM ION I - 704
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A I - 704
1jb0_A_6701jb0   A     BCRBETA-CAROTENE I - 704
1jb0_A_6701jb0   A     CACALCIUM ION V - 705
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A V - 705
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A W - 706
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A A - 707
1jb0_A_6701jb0   A     CACALCIUM ION H - 708
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A H - 708
1jb0_A_6701jb0   A     CACALCIUM ION K - 710
1jb0_A_6701jb0   A     CL1ALPHA CHLOROPHYLL A K - 710
1l8w_A_2131l8w   A     MSESELENOMETHIONINE I - 235

Clusters included in this Subclass
CLUSTER: HH.1.60
CLUSTER: HH.2.18
CLUSTER: HH.3.14
CLUSTER: HH.4.113
CLUSTER: HH.4.27