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Information on SUBCLASS 2.1.8
Subclass Accession number: 2167
Subclass: 2.1.8 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 11.9 +/- 13.7
Average RMSD (Å) : 0.553 +/- 0.181

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhpXp
(φψ)-conformation: aappaa
Pattern: x[aegknr]xxx[aegknst][ilmy][DEGNPST][deknpst][deknpqs][adenq]x
Conservation:-1.3260.128-1.067-1.178-0.916-0.2201.2990.9460.1701.2041.282-0.323
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e1o_A_451e1o   A4960HEEFDAKDNQELHHHHTT--HHHHaaaaaaxxaaaa
1f8r_A_1731f8r   A177188LNKYDTYSTKEYHHHTTSSBHHHHaaaaaabxaaaa
1fr2_B_651fr2   B6576PELSKNLNPSNKHHHHTTS-HHHHaaaaaabxaaaa
1hyp_*_251hyp   -2940CALIGGLGDIEAHHHHHTS-HHHHaaaaaaxxaaaa
1hzd_A_1431hzd   A143154LKERAKMSSSEVHHHHTTS-HHHHaaaaaabxaaaa
1j98_A_1341j98   A141152MRFWLSQDKEELHHHHHTS-HHHHaaaaaaxxaaaa
1ji1_A_4421ji1   A450461RGTRANYPTNVQHHHHTTS-HHHHaaaaaabxaaaa
1ji2_A_3911ji2   A399410TRARMLYPEQAAHHHHTTS-HHHHaaaaaabxaaaa
1l1d_A_3831l1d   A384395AELKRTLTEEQYHHHTTTS-HHHHaaaaaaxxaaaa
1ogs_A_871ogs   A90101ALNILALSPPAQHHHHTTS-HHHHaaaaaaxxaaaa
1omr_A_1191omr   A127138TAIFKMISPEDTHHHHTTS-HHHHaaaaaaxxaaaa
1ov9_A_101ov9   A1425RAYARELTIEQLHHHHTTS-HHHHaaaaaabxaaaa
1psw_A_2251psw   A229240NEILAALNTEQQHHHHTTS-HHHHaaaaaabxaaaa
1qo0_A_2361qo0   A236247EAEVAKMESDVAHHHHTTS-HHHHaaaaaaxxaaaa
1sdo_A_861sdo   A89100IRETLSLEPEEQHHHHTTS-HHHHaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8r_A_1731f8r   A     NAGN-ACETYL-D-GLUCOSAMINE S - 174
1f8r_A_1731f8r   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 175
1f8r_A_1731f8r   A     FUCFUCOSE Y - 175
1omr_A_1191omr   A     CACALCIUM ION E - 121

Clusters included in this Subclass
CLUSTER: HH.3.125
CLUSTER: HH.4.52
CLUSTER: HH.5.47
CLUSTER: HH.5.60
CLUSTER: HH.5.97