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Information on SUBCLASS 2.1.10
Subclass Accession number: 2169
Subclass: 2.1.10 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 6.3 +/- 9.0
Average RMSD (Å) : 0.800 +/- 0.200

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXhpXX
(φψ)-conformation: aappaa
Pattern: xx[adegkqrt]x[filtvwy][DKNPST][eprst][adens]xx[aefklm]
Conservation:0.172-0.960-0.401-0.7031.3882.208-0.5990.417-0.439-0.916-0.167
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cy5_A_131cy5   A1626LEKDIKTSYIMHHHH--HHHHHaaaaxxaaaaa
1hhs_A_3281hhs   A328338HDTFWPGWLRDHHHH--HHHHHaaaapxaaaaa
1j79_A_2001j79   A201211QHLMFNRNHMLHHHH--HHHHHaaaabbaaaaa
1jkv_A_971jkv   A100110TMAGMDPEHSLHHHHS-HHHHHaaaaxxaaaaa
1ppr_M_2631ppr   M273283MAGVTDTSIPLHHHH--THHHHaaaabpaaaaa
1pu6_A_1111pu6   A114124FKQEVTREWLLHHHH--HHHHHaaaaxbaaaaa
1q5n_A_591q5n   A5969AIDKIDFDALAHHHH--HHHHHaaaaxxaaaaa
1rdr_*_2371rdr   -237247YDASLSPAWFEHHHH--HHHHHaaaaxxaaaaa
1rlr_*_1181rlr   -119129LLEDYTEEEFKHHHHS-HHHHHaaaabxaaaaa
1v54_I_401v54   I5060FYRNYDSMKDFHHHT--HHHHHaaaaxbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cy5_A_131cy5   A     ZNZINC ION R - 13
1cy5_A_131cy5   A     ZNZINC ION E - 14
1cy5_A_131cy5   A     ZNZINC ION E - 17
1cy5_A_131cy5   A     ZNZINC ION S - 23
1cy5_A_131cy5   A     ZNZINC ION Y - 24
1cy5_A_131cy5   A     ZNZINC ION M - 26
1cy5_A_131cy5   A     ZNZINC ION D - 27
1cy5_A_131cy5   A     ZNZINC ION H - 28
1cy5_A_131cy5   A     ZNZINC ION I - 30
1cy5_A_131cy5   A     ZNZINC ION D - 32
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 206
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 208
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE H - 209
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE M - 210
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE L - 211
1ppr_M_2631ppr   M     PIDPERIDININ K - 263
1ppr_M_2631ppr   M     PIDPERIDININ V - 266
1ppr_M_2631ppr   M     PIDPERIDININ M - 267
1ppr_M_2631ppr   M     PIDPERIDININ V - 269
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) V - 269
1ppr_M_2631ppr   M     CLACHLOROPHYLL A Y - 270
1ppr_M_2631ppr   M     PIDPERIDININ Y - 270
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) Y - 270
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) M - 273
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) A - 274
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) T - 277
1ppr_M_2631ppr   M     PIDPERIDININ D - 278
1ppr_M_2631ppr   M     PIDPERIDININ S - 280
1ppr_M_2631ppr   M     PIDPERIDININ I - 281
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) I - 281
1ppr_M_2631ppr   M     PIDPERIDININ P - 282
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) P - 282
1ppr_M_2631ppr   M     PIDPERIDININ L - 283
1ppr_M_2631ppr   M     PIDPERIDININ N - 284
1ppr_M_2631ppr   M     PIDPERIDININ M - 285
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) M - 285
1ppr_M_2631ppr   M     PIDPERIDININ F - 286
1ppr_M_2631ppr   M     PIDPERIDININ S - 287
1v54_I_401v54   I     TGLTRISTEAROYLGLYCEROL R - 43

Clusters included in this Subclass
CLUSTER: HH.2.65
CLUSTER: HH.3.164