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Information on SUBCLASS 2.1.14
Subclass Accession number: 2173
Subclass: 2.1.14 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 17.0 +/- 15.8
Average RMSD (Å) : 0.743 +/- 0.276

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXhpXp
(φψ)-conformation: aappaa
Pattern: xxx[ail]x[DPV]x[LMY][DST][ADEP][adekr][ADEQT][ry][adkr]
Conservation:-0.987-0.842-0.749-0.187-0.6270.242-1.4452.0121.6090.733-0.4070.2730.777-0.401
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ds1_A_1771ds1   A177190VRKALPLLDERTRAHHHHGGGS-HHHHHaaaaaaaxxaaaaa
1g5a_A_41g5a   A821KTRILDIYTPEQRAHHHHGGGS-HHHHHaaaaaaaxxaaaaa
1knc_A_491knc   A5669GAEATDHLSAAARHHHHHTTT--HHHHHaaaaaaabxaaaaa
1m2r_A_1211m2r   A121134FKVLYPTLTDYDIRHHHHGGG--HHHHHaaaaaaaxxaaaaa
1o6u_A_1981o6u   A202215YNLIKPFLSEDTRKHHHHGGGS-HHHHHaaaaaaaxxaaaaa
1o9p_A_2981o9p   A303316SLDATVGLTPKEYDHHHHTTT--HHHHHaaaaaaapxaaaaa
1uch_*_1181uch   -122135FLEESVSMSPEERAHHHHTTTS-HHHHHaaaaaaaxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o6u_A_1981o6u   A     MSESELENOMETHIONINE F - 198
1o6u_A_1981o6u   A     PLMPALMITIC ACID F - 198
1o6u_A_1981o6u   A     MSESELENOMETHIONINE P - 199
1o6u_A_1981o6u   A     PLMPALMITIC ACID A - 201
1o6u_A_1981o6u   A     PLMPALMITIC ACID Y - 202
1o6u_A_1981o6u   A     PLMPALMITIC ACID L - 204
1o6u_A_1981o6u   A     PLMPALMITIC ACID I - 205
1o6u_A_1981o6u   A     PLMPALMITIC ACID L - 209
1o6u_A_1981o6u   A     PLMPALMITIC ACID T - 213
1o6u_A_1981o6u   A     MSESELENOMETHIONINE R - 214
1o6u_A_1981o6u   A     MSESELENOMETHIONINE K - 215
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6u_A_1981o6u   A AC1PLM BINDING SITE FOR CHAIN AA - 201

Clusters included in this Subclass
CLUSTER: HH.4.171
CLUSTER: HH.5.163
CLUSTER: HH.6.33
CLUSTER: HH.6.50