Information on SUBCLASS 2.1.23 |
Subclass Accession number: 2182
Subclass: 2.1.23 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7.1 (>50 %) 2.7.1.112 GO : GO:0004672 (>50 %) GO:0004714 (>50 %) GO:0004872 (>50 %) GO:0004888 (>50 %) GO:0016301 (>50 %) GO:0016773 (>50 %) GO:0019199 (>50 %) GO:0046914 (>75 %) SCOP : 56111 (>50 %) 56112 (>50 %) 88854 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 10.8 +/- 13.0 Average RMSD (Å) : 0.940 +/- 0.167 Consensus geometry
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Consensus Sequence: | XhhcXp |
(φψ)-conformation: | aappaa |
Pattern: | [dgkt] | [fmt] | [aefm] | [aqrs] | [GLMY] | [FGMTV] | [DN] | x | [EKN] | x | x | [ALV] |
Conservation: | -0.719 | -0.367 | -0.827 | -0.610 | -0.850 | -0.899 | 2.446 | -0.285 | 1.120 | 0.213 | 0.173 | 0.606 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f7u_A_194 | 1f7u | A | 202 | 213 | GFERYGNEEALV | HHHHH--HHHHH | aaaaapbaaaaa |
1gcv_B_5 | 1gcv | B | 13 | 24 | KTFQGTDMKTVV | HHHHHS-HHHHH | aaaaabxaaaaa |
1j79_A_200 | 1j79 | A | 200 | 211 | PQHLMFNRNHML | HHHHH--HHHHH | aaaaabbaaaaa |
1jkv_A_97 | 1jkv | A | 99 | 110 | TTMAGMDPEHSL | HHHHHS-HHHHH | aaaaaxxaaaaa |
1kek_A_188 | 1kek | A | 190 | 201 | DMASLVNQKALA | HHHHHS-HHHHH | aaaaaxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gcv_B_5 | 1gcv | B | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 31 |
1gcv_B_5 | 1gcv | B | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 32 |
1j79_A_200 | 1j79 | A | NCDN-CARBAMOYL-L-ASPARTATE | N - 206 |
1j79_A_200 | 1j79 | A | NCDN-CARBAMOYL-L-ASPARTATE | N - 208 |
1j79_A_200 | 1j79 | A | NCDN-CARBAMOYL-L-ASPARTATE | H - 209 |
1j79_A_200 | 1j79 | A | NCDN-CARBAMOYL-L-ASPARTATE | M - 210 |
1j79_A_200 | 1j79 | A | NCDN-CARBAMOYL-L-ASPARTATE | L - 211 |
Clusters included in this Subclass |
CLUSTER: HH.1.59 |