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Information on SUBCLASS 2.1.40
Subclass Accession number: 2199
Subclass: 2.1.40 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 47835 (>75 %)  47836 (>75 %)  47837 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 5.6 +/- 8.6
Average RMSD (Å) : 0.800 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XphXXp
(φψ)-conformation: aappaa
Pattern: [AKL][AKV][AS]xx[FKV]x[DHR][AL][CNS]x[ES]x[NR]xx[FIL][LPT]xxxx[QSY]x
Conservation:-0.618-0.3441.963-0.207-1.166-0.892-0.4810.4780.8520.478-0.4811.940-0.4812.2620.204-0.8921.163-0.481-1.440-0.481-0.618-0.0700.067-0.755
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ez0_A_291ez0   A4164KVARDFRRLNNSKRASLLRTIASEHHHHHHHHS-HHHHHHHHHHHHHHaaaaaaaaxxaaaaaaaaaaaaaa
1he1_A_1901he1   A190213AASQLVLDASPELRREITDQLHQVHHHHHHHH--HHHHHHHHHHHHHHaaaaaaaaxxaaaaaaaaaaaaaa
1j8u_A_1811j8u   A194217LKSLYKTHACYEYNHIFPLLEKYCHHHHHHHHB-HHHHHHHHHHHHHHaaaaaaaaxxaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1he1_A_1901he1   A     NINICKEL (II) ION R - 204
1he1_A_1901he1   A     NINICKEL (II) ION T - 207
1he1_A_1901he1   A     NINICKEL (II) ION D - 208
1he1_A_1901he1   A     NINICKEL (II) ION H - 211
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1he1_A_1901he1   A BC1NI BINDING SITE FOR CHAIN AH - 211

Clusters included in this Subclass
CLUSTER: HH.2.173