Information on SUBCLASS 2.1.40 |
Subclass Accession number: 2199
Subclass: 2.1.40 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 47835 (>75 %) 47836 (>75 %) 47837 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 5.6 +/- 8.6 Average RMSD (Å) : 0.800 +/- 0.173 Consensus geometry
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Consensus Sequence: | XphXXp |
(φψ)-conformation: | aappaa |
Pattern: | [AKL] | [AKV] | [AS] | x | x | [FKV] | x | [DHR] | [AL] | [CNS] | x | [ES] | x | [NR] | x | x | [FIL] | [LPT] | x | x | x | x | [QSY] | x |
Conservation: | -0.618 | -0.344 | 1.963 | -0.207 | -1.166 | -0.892 | -0.481 | 0.478 | 0.852 | 0.478 | -0.481 | 1.940 | -0.481 | 2.262 | 0.204 | -0.892 | 1.163 | -0.481 | -1.440 | -0.481 | -0.618 | -0.070 | 0.067 | -0.755 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ez0_A_29 | 1ez0 | A | 41 | 64 | KVARDFRRLNNSKRASLLRTIASE | HHHHHHHHS-HHHHHHHHHHHHHH | aaaaaaaaxxaaaaaaaaaaaaaa |
1he1_A_190 | 1he1 | A | 190 | 213 | AASQLVLDASPELRREITDQLHQV | HHHHHHHH--HHHHHHHHHHHHHH | aaaaaaaaxxaaaaaaaaaaaaaa |
1j8u_A_181 | 1j8u | A | 194 | 217 | LKSLYKTHACYEYNHIFPLLEKYC | HHHHHHHHB-HHHHHHHHHHHHHH | aaaaaaaaxxaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1he1_A_190 | 1he1 | A | NINICKEL (II) ION | R - 204 |
1he1_A_190 | 1he1 | A | NINICKEL (II) ION | T - 207 |
1he1_A_190 | 1he1 | A | NINICKEL (II) ION | D - 208 |
1he1_A_190 | 1he1 | A | NINICKEL (II) ION | H - 211 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1he1_A_190 | 1he1 | A | BC1NI BINDING SITE FOR CHAIN A | H - 211 |
Clusters included in this Subclass |
CLUSTER: HH.2.173 |