Information on SUBCLASS 2.1.42 |
Subclass Accession number: 2201
Subclass: 2.1.42 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.0 +/- 10.7 Average RMSD (Å) : 0.833 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXXXp |
(φψ)-conformation: | aappaa |
Pattern: | x | x | [AV] | x | x | [AR] | x | [NP] | x | [QRY] | [DGV] | [FIM] | x | [HN] | [ADS] | [HIL] | [GKL] | x | x |
Conservation: | 0.069 | -0.151 | 1.024 | -0.261 | -0.811 | 0.695 | -0.591 | 1.386 | -0.701 | 0.288 | -0.921 | 0.728 | -0.811 | 2.793 | 0.179 | -0.261 | -1.251 | -0.261 | -1.141 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mkm_A_63 | 1mkm | A | 69 | 87 | SFVLRRFNIRDIAHDHLVD | HHHHHH--HHHHHHHHHHH | aaaaaaxbaaaaaaaaaaa |
1pkl_A_339 | 1pkl | A | 351 | 369 | LEAQSALNEYVFFNSIKKL | HHHHHH--HHHHHHHHHHH | aaaaaaxxaaaaaaaaaaa |
2lig_A_146 | 2lig | A | 146 | 164 | MDAYFAQPTQGMQNALGEA | HHHHHHS-HHHHHHHHHHH | aaaaaaxxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | L - 64 |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | I - 65 |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | Y - 67 |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | G - 68 |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | S - 69 |
1mkm_A_63 | 1mkm | A | FMTFORMIC ACID | L - 72 |
2lig_A_146 | 2lig | A | PHN1,10-PHENANTHROLINE | Y - 176 |
Clusters included in this Subclass |
CLUSTER: HH.1.100 |