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Information on SUBCLASS 2.2.3
Subclass Accession number: 2209
Subclass: 2.2.3 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 12.9 +/- 14.7
Average RMSD (Å) : 0.685 +/- 0.223

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XpXpXX
(φψ)-conformation: aalpaa
Pattern: xx[acilmvy][agknqrs]x[dgnrs][adegnst][aenpqs]x[agilv][cfkltv]x
Conservation:-1.371-1.0701.028-0.090-0.4440.5501.3051.218-0.8431.187-0.846-0.623
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aky_*_351aky   -4152SQIAKGTQLGLEHHHHTT-HHHHHaaaaavxaaaaa
1aoa_*_3551aoa   -356367ADVVSGNPKLNLHHHHTT-HHHHHaaaaavpaaaaa
1bue_A_1191bue   A125136AALQYSDNGATNHHHHS--HHHHHaaaaalpaaaaa
1esw_A_1611esw   A161172LPLRKREEKALRHHHHTT-HHHHHaaaaalxaaaaa
1ezv_C_1111ezv   C131142GYCCVYGQMSHWHHHHT-BHHHHHaaaaalxaaaaa
1f0j_A_2831f0j   A285296FLINTNSELALMHHHHTT-HHHHHaaaaavpaaaaa
1g99_A_2841g99   A289300EAASKGNRKAELHHHHTT-HHHHHaaaaavxaaaaa
1g9g_A_4131g9g   A425436LYYKTGDARAKKHHHHH--HHHHHaaaaavpaaaaa
1gs9_A_251gs9   A3849RWVQTLSEQVQEHHHHH--HHHHHaaaaalxaaaaa
1gx5_A_1051gx5   A106117KDVRNLSSKAVNHHHHTT-HHHHHaaaaalxaaaaa
1k55_A_1081k55   A110121GAIQVSAVPVFQHHHHTT-HHHHHaaaaalxaaaaa
1klx_A_771klx   A8697KACGLNDQDGCLHHHHTT-HHHHHaaaaavxaaaaa
1l5j_A_1281l5j   A134145EKAKAGNEYAKQHHHHTT-HHHHHaaaaagxaaaaa
1mb8_A_1491mb8   A150161DDIADGNPKLTLHHHHTT-HHHHHaaaaavpaaaaa
1nst_A_7061nst   A716727HQRAHDDPVALKHHHHTT-HHHHHaaaaalxaaaaa
1q7z_A_3281q7z   A332343AEMQKGNEEIVIHHHHTT--HHHHaaaaavxaaaaa
1so2_A_8301so2   A832843FLVATNAPQAVLHHHHTT-HHHHHaaaaalpaaaaa
1ubl_L_3871ubl   L393404IAYSQGHPKVKAHHHHTT-HHHHHaaaaavpaaaaa
1zin_*_311zin   -3748AAMKEGTPLGLQHHHHHT-HHHHHaaaaavxaaaaa
2ak3_A_362ak3   A4253DNMLRGTEIGVLHHHHTT-HHHHHaaaaalxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 35
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 36
1aky_*_351aky   *     IMDIMIDAZOLE G - 36
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 37
1aky_*_351aky   *     IMDIMIDAZOLE D - 37
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE L - 39
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 40
1aky_*_351aky   *     IMDIMIDAZOLE R - 40
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE A - 53
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE I - 56
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 57
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 58
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE L - 113
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE W - 114
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 116
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE G - 117
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 118
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE I - 120
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE F - 121
1ezv_C_1111ezv   C     SMASTIGMATELLIN A T - 122
1ezv_C_1111ezv   C     SMASTIGMATELLIN A L - 123
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE T - 124
1ezv_C_1111ezv   C     SMASTIGMATELLIN A I - 125
1ezv_C_1111ezv   C     SMASTIGMATELLIN A A - 126
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE T - 127
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE A - 128
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE F - 129
1ezv_C_1111ezv   C     SMASTIGMATELLIN A F - 129
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE L - 130
1ezv_C_1111ezv   C     SMASTIGMATELLIN A L - 130
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE G - 131
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 132
1ezv_C_1111ezv   C     SMASTIGMATELLIN A Y - 132
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE C - 133
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE C - 134
1ezv_C_1111ezv   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 135
1ezv_C_1111ezv   C     SMASTIGMATELLIN A M - 139
1ezv_C_1111ezv   C     SMASTIGMATELLIN A S - 140
1ezv_C_1111ezv   C     SMASTIGMATELLIN A W - 142
1ezv_C_1111ezv   C     SMASTIGMATELLIN A G - 143
1ezv_C_1111ezv   C     SMASTIGMATELLIN A V - 146
1ezv_C_1111ezv   C     SMASTIGMATELLIN A I - 147
1ezv_C_1111ezv   C     SMASTIGMATELLIN A T - 148
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE F - 284
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE R - 285
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE D - 286
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE D - 288
1gx5_A_1051gx5   A     MSESELENOMETHIONINE I - 119
1gx5_A_1051gx5   A     MSESELENOMETHIONINE W - 123
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID A - 111
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID I - 112
1k55_A_1081k55   A     SULSULFATE ANION I - 112
1k55_A_1081k55   A     SULSULFATE ANION Q - 113
1k55_A_1081k55   A     SULSULFATE ANION V - 114
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID S - 115
1k55_A_1081k55   A     SULSULFATE ANION S - 115
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID A - 116
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID V - 117
1k55_A_1081k55   A     SULSULFATE ANION V - 117
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID F - 120
1k55_A_1081k55   A     KCXLYSINE NZ-CARBOXYLIC ACID Q - 121
1k55_A_1081k55   A     SULSULFATE ANION R - 125
1k55_A_1081k55   A     SULSULFATE ANION V - 127
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 708
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Y - 711
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE S - 712
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE W - 713
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 715
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE H - 716
1so2_A_8301so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE N - 830
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL L - 392
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL I - 393
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL Y - 395
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL S - 396
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL T - 406
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL D - 407
1ubl_L_3871ubl   L     MPD2-METHYL-2,4-PENTANEDIOL L - 410
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 31
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 32
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 33
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE F - 35
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 36
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE A - 49
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE Y - 52
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 53
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE S - 36
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE G - 37
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE D - 38
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE L - 40
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE R - 41
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE F - 57
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE I - 58

Clusters included in this Subclass
CLUSTER: HH.2.58
CLUSTER: HH.3.110
CLUSTER: HH.3.152
CLUSTER: HH.3.242
CLUSTER: HH.3.53
CLUSTER: HH.4.38