Information on SUBCLASS 2.3.4 |
Subclass Accession number: 2222
Subclass: 2.3.4 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 8.5 +/- 11.7 Average RMSD (Å) : 0.700 +/- 0.205 Consensus geometry
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Consensus Sequence: | XphchX |
(φψ)-conformation: | aabpaa |
Pattern: | x | x | [adeqrs] | x | [fglvy] | [DENR] | [gilpvy] | [dkpqs] | x | [filv] | [enqrtw] |
Conservation: | -0.592 | -0.899 | -0.425 | -0.442 | -0.471 | 2.474 | -0.497 | 0.346 | -0.007 | 1.158 | -0.645 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d8c_A_538 | 1d8c | A | 547 | 557 | HYHQTNVQSVQ | HHHHS-HHHHH | aaaabxaaaaa |
1feh_A_514 | 1feh | A | 516 | 526 | DLEKVDIKKVR | HHHHS-HHHHH | aaaabxaaaaa |
1h09_A_128 | 1h09 | A | 131 | 141 | THDNVDYQQIL | HHHH--HHHHH | aaaabbaaaaa |
1hkk_A_188 | 1hkk | A | 191 | 201 | VDAGYEVDKIA | HHHH--HHHHH | aaaabxaaaaa |
1jj2_O_84 | 1jj2 | O | 84 | 94 | AGARQNSKEDW | HHHHS-HHHHH | aaaabxaaaaa |
1jnd_A_201 | 1jnd | A | 201 | 211 | STWYFDIPALN | HHHH--HHHHH | aaaabxaaaaa |
1khc_A_290 | 1khc | A | 290 | 300 | FSQHFNLATFN | HHHH--HHHHH | aaaaxbaaaaa |
1leh_A_138 | 1leh | A | 140 | 150 | FGSSGNPSPVT | HHHH--HHHHH | aaaabxaaaaa |
1uc2_A_412 | 1uc2 | A | 415 | 425 | ATRQYRGDRIR | HHHH--HHHHH | aaaabbaaaaa |
2a0b_*_658 | 2a0b | - | 659 | 669 | SEALLDIPMLE | HHHHS-HHHHH | aaaabxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | T - 539 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | A - 540 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | A - 541 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | L - 543 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | H - 544 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | H - 547 |
1hkk_A_188 | 1hkk | A | AMIALLOSAMIZOLINE | Q - 188 |
1hkk_A_188 | 1hkk | A | AMIALLOSAMIZOLINE | Y - 190 |
1jj2_O_84 | 1jj2 | O | MGMAGNESIUM ION | S - 90 |
1jj2_O_84 | 1jj2 | O | MGMAGNESIUM ION | K - 91 |
1jnd_A_201 | 1jnd | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 201 |
1jnd_A_201 | 1jnd | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 202 |
1jnd_A_201 | 1jnd | A | NAGN-ACETYL-D-GLUCOSAMINE | W - 203 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | F - 290 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | S - 291 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | Q - 292 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | L - 296 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | A - 297 |
1khc_A_290 | 1khc | A | UNXUNKNOWN ATOM OR ION | N - 300 |
2a0b_*_658 | 2a0b | * | ZNZINC ION | L - 662 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hkk_A_188 | 1hkk | A | AC6AMI BINDING SITE FOR CHAIN A | Y - 190 |
Clusters included in this Subclass |
CLUSTER: HH.1.51 |
CLUSTER: HH.2.76 |