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Information on SUBCLASS 2.3.6
Subclass Accession number: 2224
Subclass: 2.3.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.1 (>75 %)  2.7.1.40
GO : GO:0000287 (>75 %)  GO:0004743 (>75 %)  GO:0016301 (>75 %)  GO:0016773 (>75 %)  
SCOP : 51621 (>75 %)  51622 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 9.4 +/- 11.5
Average RMSD (Å) : 0.887 +/- 0.155

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XhXcXX
(φψ)-conformation: aabpaa
Pattern: xxxx[flt][DHN][ilmptv][adknrs]x[FLMPVW]x
Conservation:-0.691-0.538-0.217-0.4760.3192.863-0.0460.098-0.525-0.221-0.567
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gcv_B_51gcv   B1424TFQGTDMKTVVHHHHS-HHHHHaaaabxaaaaa
1j79_A_2001j79   A201211QHLMFNRNHMLHHHH--HHHHHaaaabbaaaaa
1khc_A_2901khc   A290300FSQHFNLATFNHHHH--HHHHHaaaaxbaaaaa
1mzg_A_941mzg   A96106DIVNFDVRPWFHHHH---HHHHaaaaxxaaaaa
1ogl_A_331ogl   A3343WRQIRHVDDWAHHHH--HHHHHaaaaxbaaaaa
1ppr_M_1011ppr   M111121VSKITDPKVPAHHHHS-TTHHHaaaaxxaaaaa
1ppr_M_2631ppr   M273283MAGVTDTSIPLHHHH--THHHHaaaabpaaaaa
2a0b_*_6582a0b   -659669SEALLDIPMLEHHHHS-HHHHHaaaabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gcv_B_51gcv   B     HEMPROTOPORPHYRIN IX CONTAINING FE M - 31
1gcv_B_51gcv   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 32
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 206
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 208
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE H - 209
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE M - 210
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE L - 211
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION F - 290
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION S - 291
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION Q - 292
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION L - 296
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION A - 297
1khc_A_2901khc   A     UNXUNKNOWN ATOM OR ION N - 300
1mzg_A_941mzg   A     MSESELENOMETHIONINE P - 94
1mzg_A_941mzg   A     MSESELENOMETHIONINE D - 96
1mzg_A_941mzg   A     MSESELENOMETHIONINE I - 97
1mzg_A_941mzg   A     MSESELENOMETHIONINE F - 100
1mzg_A_941mzg   A     MSESELENOMETHIONINE P - 104
1mzg_A_941mzg   A     MSESELENOMETHIONINE W - 105
1mzg_A_941mzg   A     MSESELENOMETHIONINE F - 106
1mzg_A_941mzg   A     MSESELENOMETHIONINE E - 107
1ppr_M_1011ppr   M     PIDPERIDININ E - 101
1ppr_M_1011ppr   M     PIDPERIDININ V - 104
1ppr_M_1011ppr   M     PIDPERIDININ M - 105
1ppr_M_1011ppr   M     PIDPERIDININ V - 107
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) V - 107
1ppr_M_1011ppr   M     CLACHLOROPHYLL A Y - 108
1ppr_M_1011ppr   M     PIDPERIDININ Y - 108
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) Y - 108
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) V - 111
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) S - 112
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) K - 113
1ppr_M_1011ppr   M     PIDPERIDININ I - 114
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) I - 114
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) T - 115
1ppr_M_1011ppr   M     PIDPERIDININ D - 116
1ppr_M_1011ppr   M     PIDPERIDININ K - 118
1ppr_M_1011ppr   M     PIDPERIDININ V - 119
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) V - 119
1ppr_M_1011ppr   M     PIDPERIDININ P - 120
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) P - 120
1ppr_M_1011ppr   M     PIDPERIDININ A - 121
1ppr_M_1011ppr   M     PIDPERIDININ Y - 122
1ppr_M_1011ppr   M     PIDPERIDININ M - 123
1ppr_M_1011ppr   M     PIDPERIDININ K - 124
1ppr_M_1011ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) K - 124
1ppr_M_2631ppr   M     PIDPERIDININ K - 263
1ppr_M_2631ppr   M     PIDPERIDININ V - 266
1ppr_M_2631ppr   M     PIDPERIDININ M - 267
1ppr_M_2631ppr   M     PIDPERIDININ V - 269
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) V - 269
1ppr_M_2631ppr   M     CLACHLOROPHYLL A Y - 270
1ppr_M_2631ppr   M     PIDPERIDININ Y - 270
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) Y - 270
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) M - 273
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) A - 274
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) T - 277
1ppr_M_2631ppr   M     PIDPERIDININ D - 278
1ppr_M_2631ppr   M     PIDPERIDININ S - 280
1ppr_M_2631ppr   M     PIDPERIDININ I - 281
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) I - 281
1ppr_M_2631ppr   M     PIDPERIDININ P - 282
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) P - 282
1ppr_M_2631ppr   M     PIDPERIDININ L - 283
1ppr_M_2631ppr   M     PIDPERIDININ N - 284
1ppr_M_2631ppr   M     PIDPERIDININ M - 285
1ppr_M_2631ppr   M     DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG) M - 285
1ppr_M_2631ppr   M     PIDPERIDININ F - 286
1ppr_M_2631ppr   M     PIDPERIDININ S - 287
2a0b_*_6582a0b   *     ZNZINC ION L - 662

Clusters included in this Subclass
CLUSTER: HH.3.85
CLUSTER: HH.4.111