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Information on SUBCLASS 2.4.5
Subclass Accession number: 2239
Subclass: 2.4.5 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 63410 (>75 %)  63411 (>75 %)  63412 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 6.7 +/- 9.5
Average RMSD (Å) : 0.733 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXpXXX
(φψ)-conformation: aalbaa
Pattern: [AEP][FIL][HLM]x[AL][CFL][NRT][SV][NR][ADK]x[AST][CKL][AIL]x
Conservation:-0.2390.901-0.096-1.9480.6070.1880.331-0.0052.408-0.666-0.3810.758-0.8090.046-1.094
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ee4_A_2171ee4   A219233PILGLFNSNKPSLIRHHHHHTTS--HHHHHaaaaaaaavbaaaaa
1nww_A_231nww   A3044EFMDALTSNDAAKLIHHHHHGGG--HHHHHaaaaaaaalbaaaaa
1oy3_D_1301oy3   D130144ALHLACRVRAHTCACHHHHHTTTT-HHHHHaaaaaaaalxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nww_A_231nww   A     HPNHEPTANAMIDE L - 35

Clusters included in this Subclass
CLUSTER: HH.5.257