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Information on SUBCLASS 3.5.10
Subclass Accession number: 224
Subclass: 3.5.10 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 3.1 +/- 0.0
Average RMSD (Å) : 0.700 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 135-180 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppcXhhh
(φψ)-conformation: aalbpbb
Pattern: [GL][EG]x[FL][CF][AS][EL][AL][DT][ST][AR][FI][AQ][DY][AL][CE][NQ][ES][QY][GN][KL][AI][AV][IV][AP][RS][AT][CV][ST][I][DS][FL]
Conservation:-2.203-0.532-1.2010.4700.8040.470-1.869-0.8670.1360.804-0.5320.470-0.532-0.532-0.867-0.8670.8040.1360.4701.138-1.201-0.867-0.1981.8060.136-0.5320.1360.8040.8042.4740.4700.470
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jih_A_4091jih   A416447LEVFCAELTSRIQDLEQEYNKIVIPRTVSISLHHHHHHHHHHHHHHHHHHTT--EEEEEEEEEEaaaaaaaaaaaaaaaaaaalbxbbwabbbbbb
1psu_A_531psu   A5384GGQLFSLADTAFAYACNSQGLAAVASACTIDFHHHHHHHHHHHHHHHHHTTT---EEEEEEEEEaaaaaaaaaaaaaaaaaaavbpbbxabbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1psu_A_531psu   A     MSESELENOMETHIONINE Q - 55
1psu_A_531psu   A     MSESELENOMETHIONINE S - 58
1psu_A_531psu   A     MSESELENOMETHIONINE L - 59
1psu_A_531psu   A     MSESELENOMETHIONINE Y - 66
1psu_A_531psu   A     MSESELENOMETHIONINE A - 67
1psu_A_531psu   A     MSESELENOMETHIONINE N - 69
1psu_A_531psu   A     MSESELENOMETHIONINE S - 70

Clusters included in this Subclass
CLUSTER: HE.5.115