Logo
Information on SUBCLASS 2.5.6
Subclass Accession number: 2247
Subclass: 2.5.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 6.7 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XXXphX
(φψ)-conformation: aapbaa
Pattern: [L][DR][KV][AL]x[QS][MQ]xx[TY][PV][AR]x[DV][AE]
Conservation:2.8310.041-0.579-0.269-0.5790.6610.971-1.198-0.2690.3510.0410.041-1.198-0.8890.041
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eup_A_971eup   A101115LRKLVSQEFTVRRVEHHHHHHTTS-HHHHHaaaaaaaaxbaaaaa
1l6w_A_1881l6w   A188202LDVAQQMISYPAVDAHHHHHHTT--HHHHHaaaaaaaabbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eup_A_971eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 98
1eup_A_971eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 102
1eup_A_971eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 109
1l6w_A_1881l6w   A     GOLGLYCEROL F - 207

Clusters included in this Subclass
CLUSTER: HH.4.190