|
|
|
|
|
|
|
| Information on SUBCLASS 3.6.5 |
|
Subclass Accession number: 229
Subclass: 3.6.5 
Type: HE alpha-beta DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 4 Average sequence ID (%) : 10.5 +/- 10.4 Average RMSD (Å) : 1.050 +/- 0.191 Consensus geometry
|
| Consensus Sequence: | EXGXpXh |
| (φψ)-conformation: | aagpabb |
| Pattern: | x | x | x | [ALVY] | x | x | x | x | x | x | x | [G] | [AITV] | [EKST] | x | [AGLM] | [AKTV] | x | x |
| Conservation: | -0.967 | -0.272 | -0.512 | -0.058 | -0.034 | -0.603 | -0.331 | -0.467 | -0.285 | 0.824 | -0.285 | 3.808 | 0.306 | 0.306 | -0.198 | -0.331 | -0.103 | -0.285 | -0.512 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1c0a_A_331 | 1c0a | A | 334 | 352 | IDEYGNFVKIYGAKGLAYI | HHHHHHHHHHTT-S---EE | aaaaaaaaaaagxabbxbb |
| 1jj2_M_78 | 1jj2 | M | 85 | 103 | GLLAGLRAQEAGVEEAVLD | HHHHHHHHHHTT--B-EEE | aaaaaaaaaaavxabbbxb |
| 1r0t_B_41 | 1r0t | B | 41 | 59 | ECVLCAHNLEQGTSVGKKH | HHHHHHHHHHH-----EEE | aaaaaaaaaaavxaxbxab |
| 2pii_*_13 | 2pii | - | 13 | 31 | LDDVREALAEVGITGMTVT | HHHHHHHHHHHT----EEE | aaaaaaaaaaagxabbbbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | A - 346 |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | K - 347 |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | G - 348 |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | L - 349 |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | A - 350 |
| 1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | Y - 351 |
| Clusters included in this Subclass |
| CLUSTER: HE.6.59 |
| For any comment or web-related incidence, send an email to the webmaster. |
|