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Information on SUBCLASS 3.2.21
Subclass Accession number: 2295
Subclass: 3.2.21 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 46457 (>50 %)  46458 (>50 %)  46463 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 27.6 +/- 26.1
Average RMSD (Å) : 0.733 +/- 0.351

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: pLpVpXX
(φψ)-conformation: aalppaa
Pattern: [SV][DE]xx[ACL]x[EK][L][HQR][V][DS][KP]x[DN][FL][KY]x[LT]xxx[LT][LV]x[STV][LV][AN]x[HI]
Conservation:-0.8081.907-0.6550.447-0.490-1.5980.9761.8260.2151.8260.6970.726-0.2391.4440.697-0.034-0.655-0.216-1.195-0.591-1.397-0.2160.599-1.397-0.6920.509-0.501-1.1950.008
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fhj_B_861fhj   B89117SELHCDKLHVDPENFKLLGNVLVCVLAHHHHHHHHTS---THHHHHHHHHHHHHHHHHaaaaaaaalxxaaaaaaaaaaaaaaaaaa
1ird_A_811ird   A84112SDLHAHKLRVDPVNFKLLSHCLLVTLAAHHHHHHHTS---THHHHHHHHHHHHHHHHHaaaaaaaalxpaaaaaaaaaaaaaaaaaa
1n0u_A_1601n0u   A160188VDRALLELQVSKEDLYQTFARTVESVNVIHHHHHHTS---HHHHHHHHHHHHHHHHHHaaaaaaaalxxaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 88
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 91
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE H - 92
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 96
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE V - 98
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE D - 99
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE N - 102
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 103
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 106
1fhj_B_861fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE G - 107
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 83
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 86
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 87
1ird_A_811ird   A     CMOCARBON MONOXIDE H - 87
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 90
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 93
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 94
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 97
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 98
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 101
1ird_A_811ird   A     CMOCARBON MONOXIDE L - 101
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 102
1ird_A_811ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 105

Clusters included in this Subclass
CLUSTER: HH.6.127