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Information on SUBCLASS 3.2.26
Subclass Accession number: 2300
Subclass: 3.2.26 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003700 (>50 %)  GO:0003707 (>50 %)  GO:0004872 (>50 %)  GO:0004879 (>50 %)  
SCOP : 48507 (>50 %)  48508 (>50 %)  48509 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 17.6 +/- 19.6
Average RMSD (Å) : 0.533 +/- 0.115

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: chXXppp
(φψ)-conformation: aalppaa
Pattern: [HPT][EQY]x[FL]x[DK][LV][GQ][HLV][HS][EQT][DE][AE][FRY]x[CL]x
Conservation:-0.843-0.199-1.1011.426-1.1010.5720.8790.029-1.3590.440-0.1992.2000.248-0.328-1.4870.5740.248
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a28_A_7921a28   A805821PQEFVKLQVSQEEFLCMHHHHHHHT--HHHHHHHaaaaaaalpxaaaaaaa
1cyo_*_551cyo   -5571TENFEDVGHSTDARELSHHHHHHTT--HHHHHHHaaaaaaalxxaaaaaaa
1nrl_A_3221nrl   A327343HYMLKKLQLHEEEYVLMHHHHHHT---HHHHHHHaaaaaaalxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a28_A_7921a28   A     STRPROGESTERONE F - 794
1a28_A_7921a28   A     STRPROGESTERONE L - 797
1a28_A_7921a28   A     STRPROGESTERONE M - 801
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE N - 57
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 58
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 61
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE G - 62
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 63
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE S - 64
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE D - 66
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 67
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 68
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 70
1cyo_*_551cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE S - 71
1nrl_A_3221nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER M - 323
1nrl_A_3221nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER L - 324
1nrl_A_3221nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER H - 327

Clusters included in this Subclass
CLUSTER: HH.3.233