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Information on SUBCLASS 3.3.4
Subclass Accession number: 2304
Subclass: 3.3.4 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.1
GO : GO:0004807 (>75 %)  GO:0005515 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  
SCOP : 51351 (>75 %)  51352 (>75 %)  
Number of loops: 8

Average sequence ID (%) : 14.6 +/- 14.0
Average RMSD (Å) : 0.750 +/- 0.200

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXcXXXp
(φψ)-conformation: aagppaa
Pattern: x[alv]xx[agklv][afitv]x[adkt][dgk][agklv][dps][aekr][DEKQST]xxxx[AILV]x[ehnqst]
Conservation:0.0840.919-0.356-0.999-0.764-0.0280.434-0.0590.988-1.5851.0370.3191.351-1.0570.747-1.560-0.6681.858-1.2060.544
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a26_*_7031a26   -715734EVQQAVSDGGSESQILDLSNHHHHHHHTT--HHHHHHHHHaaaaaaaavxpaaaaaaaaa
1e3m_A_7721e3m   A772791GLAVAALAGVPKEVIKRARQHHHHHHHTT--HHHHHHHHHaaaaaaaagppaaaaaaaaa
1ehi_A_531ehi   A5473ESSKKILALEDEQPIVDAFMHHHHHHHTT--HHHHHHHHHaaaaaaaavxpaaaaaaaaa
1fo3_A_5281fo3   A532551TLALGVYHGLPASHMELAQEHHHHHHHTT--HHHHHHHHHaaaaaaaavxpaaaaaaaaa
1hzf_A_11711hzf   A11771196TAYALTLTKAPADLRGVAHNHHHHHHHTT--HHHHHHHHHaaaaaaaalxpaaaaaaaaa
1kq3_A_2691kq3   A277296VLASLFLTDKPRKMIEEVYSHHHHHHHTT--HHHHHHHHHaaaaaaaavxxaaaaaaaaa
1moq_*_4031moq   -416435VAKLSRLKGLDASIEHDIVHHHHHHHHTT--HHHHHHHHHaaaaaaaavxpaaaaaaaaa
1o82_A_91o82   A1433TVLNVVEAGGWVTTIVSILTHHHHHHHTT--HHHHHHHHHaaaaaaaavxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e3m_A_7721e3m   A     MSESELENOMETHIONINE G - 772
1e3m_A_7721e3m   A     MSESELENOMETHIONINE V - 775
1e3m_A_7721e3m   A     MSESELENOMETHIONINE A - 776
1e3m_A_7721e3m   A     MSESELENOMETHIONINE L - 778
1e3m_A_7721e3m   A     MSESELENOMETHIONINE A - 779
1e3m_A_7721e3m   A     MSESELENOMETHIONINE G - 780
1e3m_A_7721e3m   A     MSESELENOMETHIONINE V - 781
1fo3_A_5281fo3   A     CACALCIUM ION F - 528
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1171
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1174
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1194
1hzf_A_11711hzf   A     MSESELENOMETHIONINE H - 1195
1hzf_A_11711hzf   A     MSESELENOMETHIONINE N - 1196
1hzf_A_11711hzf   A     MSESELENOMETHIONINE N - 1197
1kq3_A_2691kq3   A     ZNZINC ION H - 269
1kq3_A_2691kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL H - 269
1kq3_A_2691kq3   A     ZNZINC ION V - 273
1kq3_A_2691kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL V - 273
1moq_*_4031moq   *     GLPGLUCOSAMINE 6-PHOSPHATE Q - 408

Clusters included in this Subclass
CLUSTER: HH.3.115
CLUSTER: HH.4.224
CLUSTER: HH.4.94